RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 MYCBPAPQ8TBZ2 947 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 TAF4BQ92750 862 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 E2F7Q96AV8 911 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 ATXN3LQ9H3M9 355 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 SLITRK6Q9H5Y7 841 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 MAGEC2Q9UBF1 373 aaPredicted RBP16.54■□□□□ 0.24
CCDC113-203ENST00000561517 KIF26AQ9ULI4 1882 aaPredicted RBP16.54■□□□□ 0.24
CCDC113-203ENST00000561517 NCANO14594 1321 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 KINO60870 393 aaKnown RBP16.53■□□□□ 0.24
CCDC113-203ENST00000561517 NOL4O94818 638 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 F11P03951 625 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 KRT13P13646 458 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 PSMC3P17980 439 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 VIPR2P41587 438 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 STARD6P59095 220 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 DDR2Q16832 855 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 ARHGAP15Q53QZ3 475 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 SDHAF4Q5VUM1 108 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 VSTM1Q6UX27 236 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 VITQ6UXI7 678 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 TMEM150AQ86TG1 271 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 ZC3H3Q8IXZ2 948 aaKnown RBP16.53■□□□□ 0.24
CCDC113-203ENST00000561517 ADSSL1Q8N142 457 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 DEPDC1BQ8WUY9 529 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 MYLPFQ96A32 169 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 TRMT2BQ96GJ1 504 aaKnown RBP16.53■□□□□ 0.24
CCDC113-203ENST00000561517 PCED1BQ96HM7 432 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 MYRFLQ96LU7 910 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 TASP1Q9H6P5 420 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 SMYD3Q9H7B4 428 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 TBC1D17Q9HA65 648 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 ZMYM5Q9UJ78 669 aa16.53■□□□□ 0.24
CCDC113-203ENST00000561517 WDFY4Q6ZS81 3184 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 CETN3O15182 167 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 PI15O43692 258 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 ASS1P00966 412 aaKnown RBP16.52■□□□□ 0.24
CCDC113-203ENST00000561517 HLA-DRAP01903 254 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 TRIM49P0CI25 452 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 TRIM49CP0CI26 452 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 PTPN1P18031 435 aaKnown RBP16.52■□□□□ 0.24
CCDC113-203ENST00000561517 NLRP12P59046 1061 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 CYP4F8P98187 520 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 PRKCQQ04759 706 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 PPP3CAQ08209 521 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 TCF15Q12870 199 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 MLF2Q15773 248 aaPredicted RBP16.52■□□□□ 0.24
CCDC113-203ENST00000561517 SLC44A4Q53GD3 710 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 MDH1BQ5I0G3 518 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 GPR158Q5T848 1215 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 ARID3BQ8IVW6 561 aaPredicted RBP16.52■□□□□ 0.24
CCDC113-203ENST00000561517 MFSD6LQ8IWD5 586 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 DNASE1L2Q92874 299 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 FAM122AQ96E09 287 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 SHDQ96IW2 340 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 CEP295NLQ96MC4 621 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 GCNAQ96QF7 691 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 DDX23Q9BUQ8 820 aaKnown RBP16.52■□□□□ 0.24
CCDC113-203ENST00000561517 TRMT61BQ9BVS5 477 aaKnown RBP16.52■□□□□ 0.24
CCDC113-203ENST00000561517 OBP2AQ9NY56 170 aa16.52■□□□□ 0.24
CCDC113-203ENST00000561517 UXTQ9UBK9 157 aaPredicted RBP16.52■□□□□ 0.24
CCDC113-203ENST00000561517 COL4A3Q01955 1670 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 SLC38A8A6NNN8 435 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 SOBPA7XYQ1 873 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 HEPACAM2A8MVW5 462 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 A8MXQ7 604 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 GALR2O43603 387 aaPredicted RBP16.51■□□□□ 0.23
CCDC113-203ENST00000561517 P4HA1P13674 534 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 BDNFP23560 247 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 GTF2H1P32780 548 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 PIK3CAP42336 1068 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 GCLMP48507 274 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 PMS1P54277 932 aaKnown RBP16.51■□□□□ 0.23
CCDC113-203ENST00000561517 CDH8P55286 799 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 GRM2Q14416 872 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 ANKRD40Q6AI12 368 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 SCN4BQ8IWT1 228 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 B3GALNT2Q8NCR0 500 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 STKLD1Q8NE28 680 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 RSPRY1Q96DX4 576 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 EEF2KMTQ96G04 330 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 SPATA17Q96L03 361 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 TSG101Q99816 390 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 SDCBP2Q9H190 292 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 DPEP3Q9H4B8 488 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 TRPV5Q9NQA5 729 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 MAN1B1Q9UKM7 699 aa16.51■□□□□ 0.23
CCDC113-203ENST00000561517 TADA3O75528 432 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 EPB41P11171 864 aaKnown RBP16.5■□□□□ 0.23
CCDC113-203ENST00000561517 DDX6P26196 483 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC113-203ENST00000561517 ANP32AP39687 249 aaKnown RBP16.5■□□□□ 0.23
CCDC113-203ENST00000561517 RAP1GAPP47736 663 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 PTPN5P54829 565 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 FKBP3Q00688 224 aaKnown RBP16.5■□□□□ 0.23
CCDC113-203ENST00000561517 CYP27A1Q02318 531 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 NHLH1Q02575 133 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 LRRC63Q05C16 580 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 FCHO2Q0JRZ9 810 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 SCARA5Q6ZMJ2 495 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 TAS1R2Q8TE23 839 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms