RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 ZC3H10Q96K80 434 aaKnown RBP9.04□□□□□ -0.96
PALB2-202ENST00000561514 CEP295NLQ96MC4 621 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 IKZF4Q9H2S9 585 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 TMEM206Q9H813 350 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 GKN1Q9NS71 199 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 TDP1Q9NUW8 608 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 FBXO2Q9UK22 296 aaPredicted RBP9.04□□□□□ -0.96
PALB2-202ENST00000561514 L1RE1Q9UN81 338 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 PCDHGA5Q9Y5G8 931 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 NUP210Q8TEM1 1887 aaPredicted RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 MYMKA6NI61 221 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 GDF9O60383 454 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 ATG13O75143 517 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 KRT18P05783 430 aaKnown RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 ZNF806P0C7X5 589 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 DRD1P21728 446 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 AVPR1AP37288 418 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 MAGEA11P43364 429 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 TSPY1Q01534 308 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 FAM160A1Q05DH4 1040 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 KCNA1Q09470 495 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 GRSF1Q12849 480 aaKnown RBP eCLIP9.03□□□□□ -0.96
PALB2-202ENST00000561514 CUL4AQ13619 759 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 ALCAMQ13740 583 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 DHX8Q14562 1220 aaKnown RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 SF3A1Q15459 793 aaKnown RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 FBXO43Q4G163 708 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 HS1BP3Q53T59 392 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 PPM1JQ5JR12 505 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 INTS6LQ5JSJ4 861 aaKnown RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 LARP1BQ659C4 914 aaKnown RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 USP49Q70CQ1 688 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 CACNA2D4Q7Z3S7 1137 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 TOP6BLQ8N6T0 577 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 KRI1Q8N9T8 703 aaKnown RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 TTC8Q8TAM2 541 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 GIPC2Q8TF65 315 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 POMGNT1Q8WZA1 660 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 MRPS31Q92665 395 aaKnown RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 EZH1Q92800 747 aaPredicted RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 EPSTI1Q96J88 318 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 PHF12Q96QT6 1004 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 SMG9Q9H0W8 520 aaKnown RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 ABI2Q9NYB9 513 aaPredicted RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 GCNT4Q9P109 453 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 UXTQ9UBK9 157 aaPredicted RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 EBF1Q9UH73 591 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 SIX4Q9UIU6 781 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 ITGA11Q9UKX5 1188 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 SMC3Q9UQE7 1217 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 SRPRBQ9Y5M8 271 aaKnown RBP9.03□□□□□ -0.96
PALB2-202ENST00000561514 IGF2RP11717 2491 aa9.03□□□□□ -0.96
PALB2-202ENST00000561514 ZFYVE26Q68DK2 2539 aa9.02□□□□□ -0.96
PALB2-202ENST00000561514 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.02□□□□□ -0.97
PALB2-202ENST00000561514 HAX1O00165 279 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 RPP40O75818 363 aaKnown RBP9.02□□□□□ -0.97
PALB2-202ENST00000561514 LDHAP00338 332 aaKnown RBP9.02□□□□□ -0.97
PALB2-202ENST00000561514 ARSAP15289 507 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 PFKLP17858 780 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 PMLP29590 882 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 POLR2BP30876 1174 aaKnown RBP9.02□□□□□ -0.97
PALB2-202ENST00000561514 GJA4P35212 333 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 GPR15P49685 360 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 RPL10AP62906 217 aaKnown RBP9.02□□□□□ -0.97
PALB2-202ENST00000561514 FAM193AP78312 1265 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 SHC2P98077 582 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 AMPD2Q01433 879 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 BECN1Q14457 450 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 MTF1Q14872 753 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 TXNDC8Q6A555 127 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 HEATR6Q6AI08 1181 aaKnown RBP9.02□□□□□ -0.97
PALB2-202ENST00000561514 TRIM68Q6AZZ1 485 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 FAM171BQ6P995 826 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 CEP68Q76N32 757 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 SYT13Q7L8C5 426 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 DPH6Q7L8W6 267 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 OSTM1Q86WC4 334 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 GPIHBP1Q8IV16 184 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 MAB21L3Q8N8X9 362 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 ZSWIM2Q8NEG5 633 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 OSCP1Q8WVF1 389 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 ACCSQ96QU6 501 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 ZHX3Q9H4I2 956 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 EBF3Q9H4W6 596 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 FBRSL1Q9HCM7 1045 aaKnown RBP9.02□□□□□ -0.97
PALB2-202ENST00000561514 ARHGAP26Q9UNA1 814 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 EXOC7Q9UPT5 735 aa9.02□□□□□ -0.97
PALB2-202ENST00000561514 KIAA0391O15091 583 aaKnown RBP9.01□□□□□ -0.97
PALB2-202ENST00000561514 RNF40O75150 1001 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 PRPF40AO75400 957 aaKnown RBP9.01□□□□□ -0.97
PALB2-202ENST00000561514 EGFP01133 1207 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 ITGB3P05106 788 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 CYP2F1P24903 491 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 PCSK1P29120 753 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 SCN1AP35498 2009 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 LHX1P48742 406 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 CASP5P51878 434 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 MYL7Q01449 175 aa9.01□□□□□ -0.97
PALB2-202ENST00000561514 BFSP1Q12934 665 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms