RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 SYN3O14994 580 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 TACC1O75410 805 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 ACO1P21399 889 aaKnown RBP12.38□□□□□ -0.43
HERC1-214ENST00000561400 MFAP3P55082 362 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 USP41Q3LFD5 358 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 OSTM1Q86WC4 334 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 VPS52Q8N1B4 723 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 UBR7Q8N806 425 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 ARNTL2Q8WYA1 636 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 N4BP2L2Q92802 583 aaPredicted RBP12.38□□□□□ -0.43
HERC1-214ENST00000561400 RTP3Q9BQQ7 232 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 CYP3A43Q9HB55 503 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 HMGXB4Q9UGU5 601 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 FBXL5Q9UKA1 691 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 EPOPA6NHQ4 379 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 GRM6O15303 877 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 GYPCP04921 128 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 PNMA6AP0CW24 399 aaPredicted RBP12.38□□□□□ -0.43
HERC1-214ENST00000561400 NAT2P11245 290 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 TYMPP19971 482 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 LMO2P25791 158 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 YWHAHQ04917 246 aaPredicted RBP12.38□□□□□ -0.43
HERC1-214ENST00000561400 RAPGEF1Q13905 1077 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 CAMK1Q14012 370 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 MRPL58Q14197 206 aaKnown RBP12.38□□□□□ -0.43
HERC1-214ENST00000561400 DRAP1Q14919 205 aaPredicted RBP12.38□□□□□ -0.43
HERC1-214ENST00000561400 FIGNQ5HY92 759 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 VARS2Q5ST30 1063 aaKnown RBP12.38□□□□□ -0.43
HERC1-214ENST00000561400 TMC6Q7Z403 805 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 SPATA21Q7Z572 469 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 TMEM86AQ8N2M4 240 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 FBXO22Q8NEZ5 403 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 WHAMMQ8TF30 809 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 POF1BQ8WVV4 589 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 TTPALQ9BTX7 342 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 C11orf84Q9BUA3 381 aaPredicted RBP12.38□□□□□ -0.43
HERC1-214ENST00000561400 CEP72Q9P209 647 aa12.38□□□□□ -0.43
HERC1-214ENST00000561400 COL4A4P53420 1690 aaPredicted RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 A0A087WUV0 522 aaPredicted RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 H3BNC9 293 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 KIF2AO00139 706 aaPredicted RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 FOXN3O00409 490 aaPredicted RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 SOX1O00570 391 aaPredicted RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 WARSP23381 471 aaKnown RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 FXR1P51114 621 aaKnown RBP eCLIP12.37□□□□□ -0.43
HERC1-214ENST00000561400 ERVFC1P60507 584 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 SLC7A5Q01650 507 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 INCA1Q0VD86 236 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 SFMBT2Q5VUG0 894 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 KIAA0319Q5VV43 1072 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 OVOS1Q6IE37 1185 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 PRSS55Q6UWB4 352 aaPredicted RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 ENOSF1Q7L5Y1 443 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 OR6B3Q8NGW1 331 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 CPLX3Q8WVH0 158 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 AUTS2Q8WXX7 1259 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 SHC3Q92529 594 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 BAP1Q92560 729 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 TWNKQ96RR1 684 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 HERC2P3Q9BVR0 1158 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 STK33Q9BYT3 514 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 DSEQ9UL01 958 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 LZTS1Q9Y250 596 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 STXBP5LQ9Y2K9 1186 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 C2CD2LO14523 706 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 KIF5CO60282 957 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 CILPO75339 1184 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 OAZ2O95190 189 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 PDGFRBP09619 1106 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 RFX1P22670 979 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 HNRNPH1P31943 449 aaKnown RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 GNL1P36915 607 aaPredicted RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 NDST1P52848 882 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 JAM2P57087 298 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 ZBED6P86452 979 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 DSG1Q02413 1049 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 TBX2Q13207 712 aaPredicted RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 ORC1Q13415 861 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 GPM6BQ13491 265 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 E2F5Q15329 346 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 ZNF394Q53GI3 561 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 CACNA2D4Q7Z3S7 1137 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 LNX1Q8TBB1 728 aaPredicted RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 RIN2Q8WYP3 895 aaPredicted RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 JAKMIP2Q96AA8 810 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 FAM81BQ96LP2 452 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 NUP58Q9BVL2 599 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 ZBP1Q9H171 429 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 RETREG1Q9H6L5 497 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 DDX43Q9NXZ2 648 aaKnown RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 PUF60Q9UHX1 559 aaKnown RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 BARX2Q9UMQ3 279 aaPredicted RBP12.37□□□□□ -0.43
HERC1-214ENST00000561400 CNTN6Q9UQ52 1028 aa12.37□□□□□ -0.43
HERC1-214ENST00000561400 ARHGEF37A1IGU5 675 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 F8VZ95 297 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 RFXAPO00287 272 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 CSPG5O95196 566 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 ACAT1P24752 427 aaKnown RBP12.36□□□□□ -0.43
HERC1-214ENST00000561400 CDC25BP30305 580 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms