RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 STK17AQ9UEE5 414 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 L1RE1Q9UN81 338 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 AGAP1Q9UPQ3 857 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 KMT2BQ9UMN6 2715 aaPredicted RBP12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 OBSL1O75147 1896 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 ZNF638Q14966 1978 aaKnown RBP12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 HUS1O60921 280 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 TADA3O75528 432 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 LDHAP00338 332 aaKnown RBP12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 ITGB3P05106 788 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 USP17L7P0C7H9 530 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 GAP43P17677 238 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 CYP2F1P24903 491 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 MPLP40238 635 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 WNT7BP56706 349 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 SHC2P98077 582 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 MYL7Q01449 175 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 ZNF77Q15935 545 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 CCDC6Q16204 474 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 DDR2Q16832 855 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 PLK5Q496M5 336 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 CFAP221Q4G0U5 840 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 N4BP2L1Q5TBK1 243 aaPredicted RBP12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 STPG1Q5TH74 334 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 DYMQ7RTS9 669 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 BRSK2Q8IWQ3 736 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 C1orf127Q8N9H9 656 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 CXorf38Q8TB03 319 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 OSCP1Q8WVF1 389 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 FUBP3Q96I24 572 aaKnown RBP eCLIP12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 EPSTI1Q96J88 318 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 FAM213AQ9BRX8 229 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 MRPL44Q9H9J2 332 aaKnown RBP12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 DUS2Q9NX74 493 aaKnown RBP12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 EBF1Q9UH73 591 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 ANGPTL2Q9UKU9 493 aa12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.71□□□□□ -0.37
CARMIL3-204ENST00000561354 SDK1Q7Z5N4 2213 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 TRAV19A0A0A6YYK7 116 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 GABRDO14764 452 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 CD2BP2O95400 341 aaKnown RBP12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 APBB3O95704 486 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 TCF3P15923 654 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 GARTP22102 1010 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 ACAT1P24752 427 aaKnown RBP12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 LHX1P48742 406 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 KCNA1Q09470 495 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 L1TD1Q5T7N2 865 aaKnown RBP12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 TOP6BLQ8N6T0 577 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 FSIP1Q8NA03 581 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 STKLD1Q8NE28 680 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 RPLP0P6Q8NHW5 317 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 CCDC26Q8TAB7 109 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 EZH1Q92800 747 aaPredicted RBP12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 CD101Q93033 1021 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 ATP2A3Q93084 1043 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 ACDQ96AP0 544 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 ACCSQ96QU6 501 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 HHIPQ96QV1 700 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 CYP2S1Q96SQ9 504 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 LSM14BQ9BX40 385 aaKnown RBP12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 DUSP15Q9H1R2 295 aaPredicted RBP12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 OLFML3Q9NRN5 406 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 RBAKQ9NYW8 714 aaPredicted RBP12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 GCNT4Q9P109 453 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 CCDC39Q9UFE4 941 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 ITGA11Q9UKX5 1188 aa12.7□□□□□ -0.38
CARMIL3-204ENST00000561354 ATG2BQ96BY7 2078 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 EML5Q05BV3 1969 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 RHOBTB1O94844 696 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 CKMP06732 381 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 PCSK1P29120 753 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 MAGEA11P43364 429 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 IFNAR2P48551 515 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 RBP5P82980 135 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 USP4Q13107 963 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 NR1H3Q13133 447 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 ALCAMQ13740 583 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 DMC1Q14565 340 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 ELF2Q15723 593 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 EML3Q32P44 896 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 NAIF1Q69YI7 327 aaPredicted RBP12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 FAM171BQ6P995 826 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 SV2BQ7L1I2 683 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 DPH6Q7L8W6 267 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 OSTM1Q86WC4 334 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 SPATA2LQ8IUW3 424 aaPredicted RBP12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 CSGALNACT2Q8N6G5 542 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 ZSWIM2Q8NEG5 633 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 DNAJC19Q96DA6 116 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 SAAL1Q96ER3 474 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 CEP295NLQ96MC4 621 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 SLC22A12Q96S37 553 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 TRPC7Q9HCX4 862 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 POLR3BQ9NW08 1133 aaPredicted RBP12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms