RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 EPHB3P54753 998 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 MARSP56192 900 aaKnown RBP14.83□□□□□ -0.04
TPM1-230ENST00000561266 TEAD2Q15562 447 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 NFE2Q16621 373 aaPredicted RBP14.83□□□□□ -0.04
TPM1-230ENST00000561266 PTPN21Q16825 1174 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 PARM1Q6UWI2 310 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 ACOT1Q86TX2 421 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 GPIHBP1Q8IV16 184 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 PLCD3Q8N3E9 789 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 B3GALNT2Q8NCR0 500 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 MYCBPAPQ8TBZ2 947 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 ACSF2Q96CM8 615 aaPredicted RBP14.83□□□□□ -0.04
TPM1-230ENST00000561266 PLA2G2FQ9BZM2 168 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 ZNF518BQ9C0D4 1074 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 ELOVL4Q9GZR5 314 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 METTL14Q9HCE5 456 aaKnown RBP14.83□□□□□ -0.04
TPM1-230ENST00000561266 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.83□□□□□ -0.04
TPM1-230ENST00000561266 A0A1W2PRU2 124 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 CLSTN1O94985 981 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 ZXDAP98168 799 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 CYP27A1Q02318 531 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 SMARCB1Q12824 385 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 LRMPQ12912 555 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 HTR4Q13639 388 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 CFAP221Q4G0U5 840 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 HSP90AA4PQ58FG1 418 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 C11orf57Q6ZUT1 292 aaPredicted RBP14.82□□□□□ -0.04
TPM1-230ENST00000561266 PDZD4Q76G19 769 aaPredicted RBP14.82□□□□□ -0.04
TPM1-230ENST00000561266 SPATA2LQ8IUW3 424 aaPredicted RBP14.82□□□□□ -0.04
TPM1-230ENST00000561266 SCN4BQ8IWT1 228 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 C12orf29Q8N999 325 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 KAT5Q92993 513 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 CNOT6LQ96LI5 555 aaKnown RBP14.82□□□□□ -0.04
TPM1-230ENST00000561266 NIF3L1Q9GZT8 377 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 ABCB6Q9NP58 842 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 ASAH2Q9NR71 780 aa14.82□□□□□ -0.04
TPM1-230ENST00000561266 MAGEC2Q9UBF1 373 aaPredicted RBP14.82□□□□□ -0.04
TPM1-230ENST00000561266 SLC38A8A6NNN8 435 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 GOLGA6L22H0YM25 854 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 CILPO75339 1184 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 TADA3O75528 432 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 F11P03951 625 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 CCDC130P13994 396 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 CD58P19256 250 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 FCARP24071 287 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 USP46P62068 366 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 CYP4F8P98187 520 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 INCA1Q0VD86 236 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 KCNH2Q12809 1159 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 PLD1Q13393 1074 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 IER5LQ5T953 404 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 IQCEQ6IPM2 695 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 FUKQ8N0W3 1084 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 CRYBG2Q8N1P7 616 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 ELMOD1Q8N336 334 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 SLC44A3Q8N4M1 653 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 ZMIZ2Q8NF64 920 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 FAM200AQ8TCP9 573 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 EDAQ92838 391 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 RSPRY1Q96DX4 576 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 FUBP3Q96I24 572 aaKnown RBP eCLIP14.81□□□□□ -0.04
TPM1-230ENST00000561266 KCNK16Q96T55 309 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 NUMBLQ9Y6R0 609 aa14.81□□□□□ -0.04
TPM1-230ENST00000561266 PATJQ8NI35 1801 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 NUP210Q8TEM1 1887 aaPredicted RBP14.8□□□□□ -0.04
TPM1-230ENST00000561266 PMM2O15305 246 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 STX10O60499 249 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 BEST1O76090 585 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 GABRR2P28476 465 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 MAGEA11P43364 429 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 APBA1Q02410 837 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 FAM78AQ5JUQ0 283 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 CYP4A22Q5TCH4 519 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 TANGO2Q6ICL3 276 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 ARHGEF19Q8IW93 802 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 UBR7Q8N806 425 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 ASIC4Q96FT7 647 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 KXD1Q9BQD3 176 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 CYP3A43Q9HB55 503 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 SAMSN1Q9NSI8 373 aaKnown RBP14.8□□□□□ -0.04
TPM1-230ENST00000561266 FAM49BQ9NUQ9 324 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 SORCS3Q9UPU3 1222 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 ASB3Q9Y575 518 aa14.8□□□□□ -0.04
TPM1-230ENST00000561266 F8VP50 259 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 NOL4O94818 638 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 MICAL2O94851 1124 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 MBD3O95983 291 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 PDGFBP01127 241 aaPredicted RBP14.79□□□□□ -0.04
TPM1-230ENST00000561266 CALCAP01258 141 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 P4HA1P13674 534 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 ERCC5P28715 1186 aaPredicted RBP14.79□□□□□ -0.04
TPM1-230ENST00000561266 ZNF394Q53GI3 561 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 CCDC183Q5T5S1 534 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 C4orf50Q6ZRC1 276 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 FAM35AQ86V20 835 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 UNC93AQ86WB7 457 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 CREBRFQ8IUR6 639 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 ASB16Q96NS5 453 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 LRRC3BQ96PB8 259 aa14.79□□□□□ -0.04
TPM1-230ENST00000561266 SMOQ99835 787 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms