RNA–Protein interactions for RNA: ENST00000561218.5

CRTC3-212, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 3

Gene CRTC3, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-212ENST00000561218 STKLD1Q8NE28 680 aa17.52■□□□□ 0.4
CRTC3-212ENST00000561218 FNBP1Q96RU3 617 aa17.52■□□□□ 0.4
CRTC3-212ENST00000561218 PKMYT1Q99640 499 aa17.52■□□□□ 0.4
CRTC3-212ENST00000561218 BLZF1Q9H2G9 400 aa17.52■□□□□ 0.4
CRTC3-212ENST00000561218 CFAP45Q9UL16 551 aa17.52■□□□□ 0.4
CRTC3-212ENST00000561218 PCDHA7Q9UN72 937 aa17.52■□□□□ 0.4
CRTC3-212ENST00000561218 TICRRQ7Z2Z1 1910 aa17.52■□□□□ 0.4
CRTC3-212ENST00000561218 UBE4BO95155 1302 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 TCHHQ07283 1943 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 SOBPA7XYQ1 873 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 CLIC2O15247 247 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 HCRTO43612 131 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 LILRB5O75023 590 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 TNNI1P19237 187 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 CASP1P29466 404 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 AFMP43652 599 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 FOXK2Q01167 660 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 CFAP221Q4G0U5 840 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 TXNDC11Q6PKC3 985 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 C4orf50Q6ZRC1 276 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 TRAPPC11Q7Z392 1133 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 SCN4BQ8IWT1 228 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 SPEM1Q8N4L4 309 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 XXYLT1Q8NBI6 393 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 SCFD1Q8WVM8 642 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 SECISBP2LQ93073 1101 aaKnown RBP17.51■□□□□ 0.39
CRTC3-212ENST00000561218 CCDC127Q96BQ5 260 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 FUBP3Q96I24 572 aaKnown RBP eCLIP17.51■□□□□ 0.39
CRTC3-212ENST00000561218 MMS19Q96T76 1030 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 SYT15Q9BQS2 421 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 RBM12Q9NTZ6 932 aaKnown RBP17.51■□□□□ 0.39
CRTC3-212ENST00000561218 TDP1Q9NUW8 608 aa17.51■□□□□ 0.39
CRTC3-212ENST00000561218 PATJQ8NI35 1801 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 PVALEFA0A1B0GWK0 134 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 ATP2C2O75185 946 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 NOL4O94818 638 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 PDGFRBP09619 1106 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 SATB1Q01826 763 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 PSMD6Q15008 389 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 PON2Q15165 354 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 MAPRE1Q15691 268 aaKnown RBP17.5■□□□□ 0.39
CRTC3-212ENST00000561218 CCDC142Q17RM4 750 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 RESP18Q5W5W9 173 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 CC2D1AQ6P1N0 951 aaPredicted RBP17.5■□□□□ 0.39
CRTC3-212ENST00000561218 FAM171BQ6P995 826 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 CEP57L1Q8IYX8 460 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 SPRYD3Q8NCJ5 442 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 USP13Q92995 863 aaPredicted RBP17.5■□□□□ 0.39
CRTC3-212ENST00000561218 TRMT2BQ96GJ1 504 aaKnown RBP17.5■□□□□ 0.39
CRTC3-212ENST00000561218 MYRFLQ96LU7 910 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 EPC1Q9H2F5 836 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 KIF9Q9HAQ2 790 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 SLC39A2Q9NP94 309 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 MAGEC2Q9UBF1 373 aaPredicted RBP17.5■□□□□ 0.39
CRTC3-212ENST00000561218 CDH9Q9ULB4 789 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 SMG5Q9UPR3 1016 aaKnown RBP17.5■□□□□ 0.39
CRTC3-212ENST00000561218 CCL26Q9Y258 94 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 COL4A2P08572 1712 aa17.5■□□□□ 0.39
CRTC3-212ENST00000561218 FANCMQ8IYD8 2048 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 TDGF1P13385 188 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 LMO2P25791 158 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 MAGEA11P43364 429 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 PSMC1P62191 440 aaKnown RBP17.49■□□□□ 0.39
CRTC3-212ENST00000561218 DNM1Q05193 864 aaKnown RBP17.49■□□□□ 0.39
CRTC3-212ENST00000561218 CYP24A1Q07973 514 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 EHHADHQ08426 723 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 CUL4BQ13620 913 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 GAS6Q14393 721 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 LIMS2Q7Z4I7 341 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 KBTBD7Q8WVZ9 684 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 CGRRF1Q99675 332 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 FAM83CQ9BQN1 747 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 SNX25Q9H3E2 840 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 TRPC7Q9HCX4 862 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 CGNQ9P2M7 1197 aaKnown RBP17.49■□□□□ 0.39
CRTC3-212ENST00000561218 RAB23Q9ULC3 237 aa17.49■□□□□ 0.39
CRTC3-212ENST00000561218 CST3P01034 146 aaPredicted RBP17.48■□□□□ 0.39
CRTC3-212ENST00000561218 WARSP23381 471 aaKnown RBP17.48■□□□□ 0.39
CRTC3-212ENST00000561218 GNL1P36915 607 aaPredicted RBP17.48■□□□□ 0.39
CRTC3-212ENST00000561218 CYP27A1Q02318 531 aa17.48■□□□□ 0.39
CRTC3-212ENST00000561218 TRPC3Q13507 836 aa17.48■□□□□ 0.39
CRTC3-212ENST00000561218 RUNX3Q13761 415 aa17.48■□□□□ 0.39
CRTC3-212ENST00000561218 KNOP1Q1ED39 458 aaKnown RBP17.48■□□□□ 0.39
CRTC3-212ENST00000561218 Q6ZS52 159 aa17.48■□□□□ 0.39
CRTC3-212ENST00000561218 SYNPOQ8N3V7 929 aa17.48■□□□□ 0.39
CRTC3-212ENST00000561218 FSIP1Q8NA03 581 aa17.48■□□□□ 0.39
CRTC3-212ENST00000561218 TTC16Q8NEE8 873 aa17.48■□□□□ 0.39
CRTC3-212ENST00000561218 MYLPFQ96A32 169 aa17.48■□□□□ 0.39
CRTC3-212ENST00000561218 EBF3Q9H4W6 596 aa17.48■□□□□ 0.39
CRTC3-212ENST00000561218 RCOR1Q9UKL0 485 aa17.48■□□□□ 0.39
CRTC3-212ENST00000561218 FRYLO94915 3013 aa17.48■□□□□ 0.39
CRTC3-212ENST00000561218 TRAV19A0A0A6YYK7 116 aa17.47■□□□□ 0.39
CRTC3-212ENST00000561218 EXOC3O60645 756 aa17.47■□□□□ 0.39
CRTC3-212ENST00000561218 CKMP06732 381 aa17.47■□□□□ 0.39
CRTC3-212ENST00000561218 USP17L7P0C7H9 530 aa17.47■□□□□ 0.39
CRTC3-212ENST00000561218 SLFN14P0C7P3 912 aa17.47■□□□□ 0.39
CRTC3-212ENST00000561218 BDNFP23560 247 aa17.47■□□□□ 0.39
CRTC3-212ENST00000561218 GRIK1P39086 918 aa17.47■□□□□ 0.39
CRTC3-212ENST00000561218 TNNC1P63316 161 aa17.47■□□□□ 0.39
CRTC3-212ENST00000561218 AMPD2Q01433 879 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms