RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 CCINQ13939 588 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 POSTNQ15063 836 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 BMT2Q1RMZ1 405 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 MGAT5BQ3V5L5 792 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 SLFN12LQ6IEE8 588 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 PRR23CQ6ZRP0 262 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 STXBP4Q6ZWJ1 553 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 DNAJB7Q7Z6W7 309 aaPredicted RBP11.55□□□□□ -0.56
TPM1-227ENST00000560970 EFCAB13Q8IY85 973 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 SYCP3Q8IZU3 236 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 BPIFB1Q8TDL5 484 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 C2orf15Q8WU43 125 aaKnown RBP11.55□□□□□ -0.56
TPM1-227ENST00000560970 ERCC4Q92889 916 aaPredicted RBP11.55□□□□□ -0.56
TPM1-227ENST00000560970 FAM212AQ96EL1 285 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 ZFYVE19Q96K21 471 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 FAM84AQ96KN4 292 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 CNTNAP3BQ96NU0 1288 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 LPIN3Q9BQK8 851 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 CNTNAP3Q9BZ76 1288 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 ZCWPW1Q9H0M4 648 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 TMEM206Q9H813 350 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 GTSE1Q9NYZ3 720 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 ZMYM5Q9UJ78 669 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 SLC27A5Q9Y2P5 690 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 C2CD2Q9Y426 696 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.55□□□□□ -0.56
TPM1-227ENST00000560970 LAMA1P25391 3075 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 CHD8Q9HCK8 2581 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 USP24Q9UPU5 2620 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 ANO9A1A5B4 782 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 PIRO00625 290 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 SLC30A4O14863 429 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 FOXD2O60548 495 aaPredicted RBP11.54□□□□□ -0.56
TPM1-227ENST00000560970 RHOBTB3O94955 611 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 WEE1P30291 646 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 TUFMP49411 452 aaKnown RBP11.54□□□□□ -0.56
TPM1-227ENST00000560970 TAF6P49848 677 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 VASPP50552 380 aaPredicted RBP11.54□□□□□ -0.56
TPM1-227ENST00000560970 SRSF5Q13243 272 aaKnown RBP11.54□□□□□ -0.56
TPM1-227ENST00000560970 PON2Q15165 354 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 CSRP2Q16527 193 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 SLC39A12Q504Y0 691 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 BRSK2Q8IWQ3 736 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 SYNPOQ8N3V7 929 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 SPPL2BQ8TCT7 592 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 ZNF560Q96MR9 790 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 FAM213AQ9BRX8 229 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 ASB7Q9H672 318 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 TASP1Q9H6P5 420 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 IL21Q9HBE4 155 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 AGPAT3Q9NRZ7 376 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 SEMA4GQ9NTN9 838 aa11.54□□□□□ -0.56
TPM1-227ENST00000560970 CEP192Q8TEP8 1941 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.53□□□□□ -0.56
TPM1-227ENST00000560970 DCDC2BA2VCK2 349 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 CLIC2O15247 247 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 EXTL3O43909 919 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 ADRB1P08588 477 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 HOXA6P31267 233 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 TNK2Q07912 1038 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 SMARCB1Q12824 385 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 SV2CQ496J9 727 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 HEATR6Q6AI08 1181 aaKnown RBP11.53□□□□□ -0.56
TPM1-227ENST00000560970 CEP68Q76N32 757 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 WDR5BQ86VZ2 330 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 METTL23Q86XA0 190 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 SMYD4Q8IYR2 804 aaPredicted RBP11.53□□□□□ -0.56
TPM1-227ENST00000560970 FAM160A2Q8N612 972 aaPredicted RBP11.53□□□□□ -0.56
TPM1-227ENST00000560970 TTC8Q8TAM2 541 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 NOC3LQ8WTT2 800 aaKnown RBP11.53□□□□□ -0.56
TPM1-227ENST00000560970 LRRC3BQ96PB8 259 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 KCTD10Q9H3F6 313 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 KIF9Q9HAQ2 790 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 ABI2Q9NYB9 513 aaPredicted RBP11.53□□□□□ -0.56
TPM1-227ENST00000560970 HSPBP1Q9NZL4 362 aa11.53□□□□□ -0.56
TPM1-227ENST00000560970 TPRP12270 2363 aaKnown RBP11.53□□□□□ -0.56
TPM1-227ENST00000560970 THADAQ6YHU6 1953 aa11.52□□□□□ -0.56
TPM1-227ENST00000560970 CYB561D2O14569 222 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 HRO43593 1189 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 DDX6P26196 483 aaKnown RBP eCLIP11.52□□□□□ -0.57
TPM1-227ENST00000560970 CYP2J2P51589 502 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 KCNB1Q14721 858 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 TAF12Q16514 161 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 KNOP1Q1ED39 458 aaKnown RBP11.52□□□□□ -0.57
TPM1-227ENST00000560970 PPM1JQ5JR12 505 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 SCARA3Q6AZY7 606 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 CBWD2Q8IUF1 395 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 THEM5Q8N1Q8 247 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 GPD1LQ8N335 351 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 SMG9Q9H0W8 520 aaKnown RBP11.52□□□□□ -0.57
TPM1-227ENST00000560970 C2orf42Q9NWW7 574 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 THG1LQ9NWX6 298 aaKnown RBP11.52□□□□□ -0.57
TPM1-227ENST00000560970 RBAKQ9NYW8 714 aaPredicted RBP11.52□□□□□ -0.57
TPM1-227ENST00000560970 PTPRJQ12913 1337 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 MYH10P35580 1976 aa11.52□□□□□ -0.57
TPM1-227ENST00000560970 IL18RAPO95256 599 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 HAPLN1P10915 354 aaPredicted RBP11.51□□□□□ -0.57
TPM1-227ENST00000560970 AVPR1AP37288 418 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 PNPLA4P41247 253 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms