RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ECI2O75521 394 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 FAM163BP0C2L3 166 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 PTPN1P18031 435 aaKnown RBP13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 PMS1P54277 932 aaKnown RBP13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 CYP4F8P98187 520 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 LRRC63Q05C16 580 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 PPP3CAQ08209 521 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 CFAP221Q4G0U5 840 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 C1orf220Q5T0J3 134 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 STXBP5Q5T5C0 1151 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 KRT39Q6A163 491 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 SPOPLQ6IQ16 392 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 FAM171BQ6P995 826 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 GAREM2Q75VX8 874 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 YAF2Q8IY57 180 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 TAF4BQ92750 862 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 ELSPBP1Q96BH3 223 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 PCED1BQ96HM7 432 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 DHTKD1Q96HY7 919 aaPredicted RBP13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 TNIP3Q96KP6 325 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 PKMYT1Q99640 499 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 MED10Q9BTT4 135 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 LRRC3Q9BY71 257 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 DPEP3Q9H4B8 488 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 CRTAC1Q9NQ79 661 aa13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 CCNE1P24864 410 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 AVPR2P30518 371 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 VIPR2P41587 438 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 MXI1P50539 228 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 VCPP55072 806 aaKnown RBP13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 PFKPQ01813 784 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 CCDC40Q4G0X9 1142 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 VSTM1Q6UX27 236 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 B3GALNT2Q8NCR0 500 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 TTC16Q8NEE8 873 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 MYCBPAPQ8TBZ2 947 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 TAS1R2Q8TE23 839 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 NELFBQ8WX92 580 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 TRMT61BQ9BVS5 477 aaKnown RBP13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 PLA2G2FQ9BZM2 168 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 BRD9Q9H8M2 597 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 VRTNQ9H8Y1 702 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 TMEM8AQ9HCN3 771 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 ARHGEF3Q9NR81 526 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 SLC2A4RGQ9NR83 387 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 UXTQ9UBK9 157 aaPredicted RBP13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 CTNND2Q9UQB3 1225 aa13.83□□□□□ -0.2
CTDSPL2-209ENST00000560620 BICDL2A1A5D9 508 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 KRBA1A5PL33 1030 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 SLC38A8A6NNN8 435 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 TRIM66O15016 1216 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 SLC16A3O15427 465 aaKnown RBP13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 ASS1P00966 412 aaKnown RBP13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 GTF2H1P32780 548 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 AVPR1AP37288 418 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 MAGEA11P43364 429 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 NOP14P78316 857 aaKnown RBP13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 ENPEPQ07075 957 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 IFRD2Q12894 506 aaPredicted RBP13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 ORC1Q13415 861 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 WDR44Q5JSH3 913 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 ASTLQ6HA08 431 aaPredicted RBP13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 POTEHQ6S545 545 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 ACOT1Q86TX2 421 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 ARID3BQ8IVW6 561 aaPredicted RBP13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 MRPS31Q92665 395 aaKnown RBP13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 SHDQ96IW2 340 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 DNAI2Q9GZS0 605 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 ARMCX3Q9UH62 379 aaPredicted RBP13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 ATP8B3O60423 1300 aa13.82□□□□□ -0.2
CTDSPL2-209ENST00000560620 HEPACAM2A8MVW5 462 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 F8VP50 259 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 CLDN5O00501 218 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 ZNF263O14978 683 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 HMGA1P17096 107 aaKnown RBP13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 PSMC3P17980 439 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 CD58P19256 250 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 FCARP24071 287 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 GDI1P31150 447 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 NDST1P52848 882 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 STX17P56962 302 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 NLRP12P59046 1061 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 PAK1Q13153 545 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 MORC3Q14149 939 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 VITQ6UXI7 678 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 MAB21L3Q8N8X9 362 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 FBXL13Q8NEE6 735 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 DEPDC1BQ8WUY9 529 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 E2F7Q96AV8 911 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 ELOVL4Q9GZR5 314 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 SDCBP2Q9H190 292 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 TASP1Q9H6P5 420 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 TBC1D17Q9HA65 648 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 IL21Q9HBE4 155 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 TRPC7Q9HCX4 862 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 KIAA1468Q9P260 1216 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 NME7Q9Y5B8 376 aa13.81□□□□□ -0.2
CTDSPL2-209ENST00000560620 PPP1R3GB7ZBB8 358 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms