RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 KIF9Q9HAQ2 790 aa10.9□□□□□ -0.66
SNRPA1-212ENST00000560496 INTS13Q9NVM9 706 aa10.9□□□□□ -0.66
SNRPA1-212ENST00000560496 HSPBP1Q9NZL4 362 aa10.9□□□□□ -0.66
SNRPA1-212ENST00000560496 NME7Q9Y5B8 376 aa10.9□□□□□ -0.66
SNRPA1-212ENST00000560496 SNX9Q9Y5X1 595 aa10.9□□□□□ -0.66
SNRPA1-212ENST00000560496 SPAG17Q6Q759 2223 aa10.9□□□□□ -0.66
SNRPA1-212ENST00000560496 RALGAPA1Q6GYQ0 2036 aa10.9□□□□□ -0.66
SNRPA1-212ENST00000560496 ZFHX4Q86UP3 3567 aa10.9□□□□□ -0.67
SNRPA1-212ENST00000560496 UBE4BO95155 1302 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 WDFY3Q8IZQ1 3526 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 KIAA0391O15091 583 aaKnown RBP10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 TGFB1I1O43294 461 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 PRPF40AO75400 957 aaKnown RBP10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 KRT19P08727 400 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 CYP2F1P24903 491 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 PSMC1P62191 440 aaKnown RBP10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 MYL7Q01449 175 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 SRSF5Q13243 272 aaKnown RBP10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 ZNF268Q14587 947 aaPredicted RBP10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 ZNF77Q15935 545 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 DDR2Q16832 855 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 ITPRIPL2Q3MIP1 535 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 NAIF1Q69YI7 327 aaPredicted RBP10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 TXNDC8Q6A555 127 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 CSGALNACT2Q8N6G5 542 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 NOC3LQ8WTT2 800 aaKnown RBP10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 CACTINQ8WUQ7 758 aaKnown RBP10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 FUBP3Q96I24 572 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 ANKRD36BP1Q96IX9 119 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 MYRFLQ96LU7 910 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 FAM83CQ9BQN1 747 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 CUEDC2Q9H467 287 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 AGPAT3Q9NRZ7 376 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 ZMYM5Q9UJ78 669 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 GTF3C4Q9UKN8 822 aa10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 MAGED2Q9UNF1 606 aaPredicted RBP10.89□□□□□ -0.67
SNRPA1-212ENST00000560496 TNRC6BQ9UPQ9 1833 aaKnown RBP10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 CHURC1-FNTBB4DL54 471 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 ARSAP15289 507 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 PCSK1P29120 753 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 CASP1P29466 404 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 AVPR1AP37288 418 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 MAGEA11P43364 429 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 CXCL12P48061 93 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 FNTBP49356 437 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 NRLP54845 237 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 ASIC1P78348 528 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 RBP5P82980 135 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 PPP2R5DQ14738 602 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 TAF12Q16514 161 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 LPAL2Q16609 132 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 TMEM196Q5HYL7 178 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 DGKKQ5KSL6 1271 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 FAM26FQ5R3K3 315 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 FSTL4Q6MZW2 842 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 FAM171BQ6P995 826 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 DGLUCYQ7Z3D6 616 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 MON1AQ86VX9 555 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 WDR49Q8IV35 697 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 ZNF507Q8TCN5 953 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 SCFD1Q8WVM8 642 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 MRPS31Q92665 395 aaKnown RBP10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 MYLPFQ96A32 169 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 SLC22A12Q96S37 553 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 SYT15Q9BQS2 421 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 EBF3Q9H4W6 596 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 CRTAC1Q9NQ79 661 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 TDP1Q9NUW8 608 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 UXTQ9UBK9 157 aaPredicted RBP10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 ATG2BQ96BY7 2078 aa10.88□□□□□ -0.67
SNRPA1-212ENST00000560496 C2orf78A6NCI8 922 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 ZNF233A6NK53 670 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 SOBPA7XYQ1 873 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 CUTAO60888 179 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 ATP2C2O75185 946 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 TNNC2P02585 160 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 WARSP23381 471 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 LMO2P25791 158 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 LHX1P48742 406 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 CLCN6P51797 869 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 RPL10AP62906 217 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 FAM160A1Q05DH4 1040 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 RUNX3Q13761 415 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 PKP1Q13835 747 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 PUM1Q14671 1186 aaKnown RBP eCLIP10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 MTF1Q14872 753 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 PSMD6Q15008 389 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 SNRNP35Q16560 246 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 BMT2Q1RMZ1 405 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 RSPO4Q2I0M5 234 aaPredicted RBP10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 LAIR1Q6GTX8 287 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 STXBP4Q6ZWJ1 553 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 UNC13DQ70J99 1090 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 DPH6Q7L8W6 267 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 SPATA2LQ8IUW3 424 aaPredicted RBP10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 EZH1Q92800 747 aaPredicted RBP10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 SNX21Q969T3 373 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 HPDLQ96IR7 371 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 CGRRF1Q99675 332 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 C7orf25Q9BPX7 421 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms