RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 PSMB7Q99436 277 aa11.23□□□□□ -0.61
CRTC3-209ENST00000560320 NAP1L3Q99457 506 aaPredicted RBP11.23□□□□□ -0.61
CRTC3-209ENST00000560320 ZSWIM1Q9BR11 485 aa11.23□□□□□ -0.61
CRTC3-209ENST00000560320 MED10Q9BTT4 135 aa11.23□□□□□ -0.61
CRTC3-209ENST00000560320 ABCB6Q9NP58 842 aa11.23□□□□□ -0.61
CRTC3-209ENST00000560320 ST7Q9NRC1 585 aa11.23□□□□□ -0.61
CRTC3-209ENST00000560320 FAM49BQ9NUQ9 324 aa11.23□□□□□ -0.61
CRTC3-209ENST00000560320 IP6K2Q9UHH9 426 aa11.23□□□□□ -0.61
CRTC3-209ENST00000560320 PACSIN2Q9UNF0 486 aaPredicted RBP11.23□□□□□ -0.61
CRTC3-209ENST00000560320 COG5Q9UP83 839 aa11.23□□□□□ -0.61
CRTC3-209ENST00000560320 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.23□□□□□ -0.61
CRTC3-209ENST00000560320 CDH23Q9H251 3354 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 CCDC66A2RUB6 948 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 TRAPPC3O43617 180 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 CEP104O60308 925 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 TADA3O75528 432 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 CLTBP09497 229 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 FGFR1P11362 822 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 PTPN1P18031 435 aaKnown RBP11.22□□□□□ -0.61
CRTC3-209ENST00000560320 COMTP21964 271 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 CXCR5P32302 372 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 ACADSBP45954 432 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 TSC2P49815 1807 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 FAAP100Q0VG06 881 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 BST2Q10589 180 aaKnown RBP11.22□□□□□ -0.61
CRTC3-209ENST00000560320 PTP4A2Q12974 167 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 MAMLD1Q13495 774 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 IKBKEQ14164 716 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 FNDC1Q4ZHG4 1894 aaPredicted RBP11.22□□□□□ -0.61
CRTC3-209ENST00000560320 PPP1R26Q5T8A7 1209 aaPredicted RBP11.22□□□□□ -0.61
CRTC3-209ENST00000560320 SEL1L2Q5TEA6 688 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 CNKSR3Q6P9H4 555 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 LIMS2Q7Z4I7 341 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 PHLDB2Q86SQ0 1253 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 NPAS4Q8IUM7 802 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 C3orf20Q8ND61 904 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 UBA3Q8TBC4 463 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 KBTBD7Q8WVZ9 684 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 LINC01599Q8WXQ3 324 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 HES6Q96HZ4 224 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 SCLYQ96I15 445 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 SYT15Q9BQS2 421 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 MRPL9Q9BYD2 267 aaKnown RBP11.22□□□□□ -0.61
CRTC3-209ENST00000560320 DDX43Q9NXZ2 648 aaKnown RBP11.22□□□□□ -0.61
CRTC3-209ENST00000560320 CDH9Q9ULB4 789 aa11.22□□□□□ -0.61
CRTC3-209ENST00000560320 ALPK3Q96L96 1907 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 GOLGA8SH3BPF8 625 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 PGRMC1O00264 195 aaKnown RBP11.21□□□□□ -0.61
CRTC3-209ENST00000560320 ZNF185O15231 689 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 PROSCO94903 275 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 CXCL10P02778 98 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 TYMPP19971 482 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 ADORA2BP29275 332 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 CYP2C18P33260 490 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 MAN1A1P33908 653 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 BMP8BP34820 402 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 CETN2P41208 172 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 GPD2P43304 727 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 SSR1P43307 286 aaKnown RBP11.21□□□□□ -0.61
CRTC3-209ENST00000560320 OR1G1P47890 313 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 AFF1P51825 1210 aaKnown RBP11.21□□□□□ -0.61
CRTC3-209ENST00000560320 GSCP56915 257 aaPredicted RBP11.21□□□□□ -0.61
CRTC3-209ENST00000560320 PDCLQ13371 301 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 PIGHQ14442 188 aaPredicted RBP11.21□□□□□ -0.61
CRTC3-209ENST00000560320 MAPRE1Q15691 268 aaKnown RBP11.21□□□□□ -0.61
CRTC3-209ENST00000560320 PTPROQ16827 1216 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 PTPN20Q4JDL3 420 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 TIGD5Q53EQ6 642 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 ODF2Q5BJF6 829 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 CLLU1OSQ5K130 101 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 OR6B2Q6IFH4 312 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 DEFB128Q7Z7B8 93 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 OSTM1Q86WC4 334 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 WDTC1Q8N5D0 677 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 C12orf29Q8N999 325 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 ANKRD52Q8NB46 1076 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 B3GALNT2Q8NCR0 500 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 DIS3LQ8TF46 1054 aaKnown RBP11.21□□□□□ -0.61
CRTC3-209ENST00000560320 COG1Q8WTW3 980 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 STK32AQ8WU08 396 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 RABGGTAQ92696 567 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 COLEC11Q9BWP8 271 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 GOLPH3Q9H4A6 298 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 CYLDQ9NQC7 956 aa11.21□□□□□ -0.61
CRTC3-209ENST00000560320 CHORDC1Q9UHD1 332 aaPredicted RBP11.21□□□□□ -0.61
CRTC3-209ENST00000560320 SIGLEC16A6NMB1 481 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 TMEM189-UBE2V1I3L0A0 370 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 GABRDO14764 452 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 TADA2AO75478 443 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 CYP11A1P05108 521 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 FAM200BP0CF97 657 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 KRT3P12035 628 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 LMO2P25791 158 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 CTNNA2P26232 953 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 GABRB2P47870 512 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 AARSP49588 968 aaKnown RBP eCLIP11.2□□□□□ -0.62
CRTC3-209ENST00000560320 RWDD2BP57060 319 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 TSPY1Q01534 308 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 ITIH3Q06033 890 aa11.2□□□□□ -0.62
CRTC3-209ENST00000560320 C2CD6Q53TS8 623 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms