RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 MAGED2Q9UNF1 606 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-216ENST00000560243 ARIH1Q9Y4X5 557 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-216ENST00000560243 WDR87Q6ZQQ6 2873 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 TRIM49BA6NDI0 452 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 SLC38A8A6NNN8 435 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 STK25O00506 426 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 IKBKBO14920 756 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 KINO60870 393 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 CLSTN1O94985 981 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 PRAMEF12O95522 483 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 HLA-DRAP01903 254 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 F11P03951 625 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 PTPN1P18031 435 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 AOC1P19801 751 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 CD72P21854 359 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 BMP6P22004 513 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 BDNFP23560 247 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 RPL13P26373 211 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 PSMC2P35998 433 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 PLA2G5P39877 138 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 CACNA2D1P54289 1103 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 NLRP12P59046 1061 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 CYP27A1Q02318 531 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 TCF15Q12870 199 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 TAF12Q16514 161 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 EDRF1Q3B7T1 1238 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 SLC44A4Q53GD3 710 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 ZNF667Q5HYK9 610 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 ANKRD40Q6AI12 368 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 INTS8Q75QN2 995 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 ARID3BQ8IVW6 561 aaPredicted RBP12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 ADSSL1Q8N142 457 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 MYCBPAPQ8TBZ2 947 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 TAS1R2Q8TE23 839 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 SLC46A2Q9BY10 475 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 FOXQ1Q9C009 403 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 SMG9Q9H0W8 520 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 TMEM30AQ9NV96 361 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 MAGEC2Q9UBF1 373 aaPredicted RBP12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 TICRRQ7Z2Z1 1910 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 NUP210Q8TEM1 1887 aaPredicted RBP12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 VPS13AQ96RL7 3174 aa12.44□□□□□ -0.42
RABGGTA-216ENST00000560243 ZNF638Q14966 1978 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 COL4A2P08572 1712 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 ANAPC1Q9H1A4 1944 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 SHISA7A6NL88 538 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 HEPACAM2A8MVW5 462 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 A8MXQ7 604 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 CLDN5O00501 218 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 TADA3O75528 432 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 NOL4O94818 638 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 FGF19O95750 216 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 ASS1P00966 412 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 KRT13P13646 458 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 GDI1P31150 447 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 PIK3CAP42336 1068 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 MAGEA11P43364 429 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 RPL10AP62906 217 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 NHLH1Q02575 133 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 ORC1Q13415 861 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 SGSM1Q2NKQ1 1148 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 COBLL1Q53SF7 1204 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 C4orf50Q6ZRC1 276 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 ELOA2Q8IYF1 753 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 B3GALNT2Q8NCR0 500 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 FAM122AQ96E09 287 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 FUBP3Q96I24 572 aaKnown RBP eCLIP12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 TRMT61BQ9BVS5 477 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 B3GNT5Q9BYG0 378 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 ZNF518BQ9C0D4 1074 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 GPR88Q9GZN0 384 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 APOBEC3GQ9HC16 384 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 HMGXB4Q9UGU5 601 aa12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 HOOK1Q9UJC3 728 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 MTF2Q9Y483 593 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-216ENST00000560243 BIN1O00499 593 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 CETN3O15182 167 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 DCNP07585 359 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 FAM163BP0C2L3 166 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 CSH1P0DML2 217 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 CSH2P0DML3 217 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 PSMC3P17980 439 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 CDC25CP30307 473 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 GRIK1P39086 918 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 ASPAP45381 313 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 STARD6P59095 220 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 MCCD1P59942 119 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 USP46P62068 366 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 MAPRE1Q15691 268 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 MLF2Q15773 248 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 ARHGAP15Q53QZ3 475 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 TXNDC8Q6A555 127 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 MFSD6LQ8IWD5 586 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 ZC3H3Q8IXZ2 948 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 MAB21L3Q8N8X9 362 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 SEMA4DQ92854 862 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 MYRFLQ96LU7 910 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 GCNAQ96QF7 691 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 KCNH6Q9H252 994 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms