RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CGB1A6NKQ9 187 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 TARM1B6A8C7 271 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 UNC5CO95185 931 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 GRPP07492 148 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 CYP2C9P11712 490 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 XRCC6P12956 609 aaKnown RBP eCLIP4.67□□□□□ -1.66
SPG11-218ENST00000559754 HSPA6P17066 643 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 ZNF134P52741 427 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 GRM1Q13255 1194 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 E2F2Q14209 437 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 FGL2Q14314 439 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 ODR4Q5SWX8 454 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 FMNL3Q8IVF7 1028 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.67□□□□□ -1.66
SPG11-218ENST00000559754 JDP2Q8WYK2 163 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 SMG7Q92540 1137 aaKnown RBP4.67□□□□□ -1.66
SPG11-218ENST00000559754 SLC29A3Q9BZD2 475 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 SEMA4CQ9C0C4 833 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 SERHLQ9NQF3 203 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 KAT6AQ92794 2004 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 MYO1CO00159 1063 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 DCLK1O15075 740 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 EIF3JO75822 258 aaKnown RBP4.66□□□□□ -1.66
SPG11-218ENST00000559754 ALDH2P05091 517 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 CELA2AP08217 269 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 JUPP14923 745 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 PCSK6P29122 969 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 LRPAP1P30533 357 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 EEFSECP57772 596 aaKnown RBP4.66□□□□□ -1.66
SPG11-218ENST00000559754 LILRA4P59901 499 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 PIN1Q13526 163 aaPredicted RBP4.66□□□□□ -1.66
SPG11-218ENST00000559754 EZH2Q15910 746 aaKnown RBP4.66□□□□□ -1.66
SPG11-218ENST00000559754 ARHGAP40Q5TG30 622 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 SMC5Q8IY18 1101 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 FANCBQ8NB91 859 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 DIS3LQ8TF46 1054 aaKnown RBP4.66□□□□□ -1.66
SPG11-218ENST00000559754 DPF1Q92782 380 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 AIFM3Q96NN9 605 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 CAMKK2Q96RR4 588 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 ARMT1Q9H993 441 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 GLOD4Q9HC38 313 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 NMRK2Q9NPI5 230 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 PIH1D1Q9NWS0 290 aaKnown RBP4.66□□□□□ -1.66
SPG11-218ENST00000559754 XPR1Q9UBH6 696 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 SERTAD3Q9UJW9 196 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 MED16Q9Y2X0 877 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 TMX2Q9Y320 296 aa4.66□□□□□ -1.66
SPG11-218ENST00000559754 A0A088AWK7 358 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 H3BML4 177 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 AP1G1O43747 822 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 PEX14O75381 377 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 PDHA1P08559 390 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 WNT3P56703 355 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 TBX4P57082 545 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 TFF2Q03403 129 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 TTF1Q15361 905 aaPredicted RBP4.65□□□□□ -1.67
SPG11-218ENST00000559754 SRSF7Q16629 238 aaKnown RBP eCLIP4.65□□□□□ -1.67
SPG11-218ENST00000559754 TREML2Q5T2D2 321 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 DAAM2Q86T65 1068 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 DENND1CQ8IV53 801 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 RP9Q8TA86 221 aaKnown RBP4.65□□□□□ -1.67
SPG11-218ENST00000559754 ATG4AQ8WYN0 398 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 C8orf48Q96LL4 319 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 SLC12A5Q9H2X9 1139 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 CPA4Q9UI42 421 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 ZNF180Q9UJW8 692 aa4.65□□□□□ -1.67
SPG11-218ENST00000559754 NDRG4Q9ULP0 352 aaKnown RBP4.65□□□□□ -1.67
SPG11-218ENST00000559754 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.65□□□□□ -1.67
SPG11-218ENST00000559754 H0YIZ8 118 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 PRC1O43663 620 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 IL6RP08887 468 aaPredicted RBP4.64□□□□□ -1.67
SPG11-218ENST00000559754 NPSP0C0P6 89 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 CERS1P27544 350 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 HTR1BP28222 390 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 CYP2C18P33260 490 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 ATXN1P54253 815 aaKnown RBP4.64□□□□□ -1.67
SPG11-218ENST00000559754 PDE1AP54750 535 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 RAB1AP62820 205 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 MCL1Q07820 350 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 HNRNPA0Q13151 305 aaKnown RBP4.64□□□□□ -1.67
SPG11-218ENST00000559754 GTF2H3Q13889 308 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 TBC1D25Q3MII6 688 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 PCID2Q5JVF3 399 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 RGS7BPQ6MZT1 257 aaPredicted RBP4.64□□□□□ -1.67
SPG11-218ENST00000559754 PARS2Q7L3T8 475 aaKnown RBP4.64□□□□□ -1.67
SPG11-218ENST00000559754 MAVSQ7Z434 540 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 CCDC146Q8IYE0 955 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 LRRC71Q8N4P6 559 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 DDB2Q92466 427 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 RHOBTB2Q9BYZ6 727 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 DUSP22Q9NRW4 184 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 DLL3Q9NYJ7 618 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 SH3BP4Q9P0V3 963 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 GABBR1Q9UBS5 961 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 SERGEFQ9UGK8 458 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 TCEAL9Q9UHQ7 104 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 SSX2IPQ9Y2D8 614 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 PAXBP1Q9Y5B6 917 aa4.64□□□□□ -1.67
SPG11-218ENST00000559754 RFPL1O75677 317 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 FESP07332 822 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms