RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 ACBD6Q9BR61 282 aa11.94□□□□□ -0.5
HERC1-204ENST00000559715 PI4K2AQ9BTU6 479 aa11.94□□□□□ -0.5
HERC1-204ENST00000559715 DUSP15Q9H1R2 295 aaPredicted RBP11.94□□□□□ -0.5
HERC1-204ENST00000559715 SMOC1Q9H4F8 434 aa11.94□□□□□ -0.5
HERC1-204ENST00000559715 GCNT4Q9P109 453 aa11.94□□□□□ -0.5
HERC1-204ENST00000559715 ZMYM5Q9UJ78 669 aa11.94□□□□□ -0.5
HERC1-204ENST00000559715 FBXO2Q9UK22 296 aaPredicted RBP11.94□□□□□ -0.5
HERC1-204ENST00000559715 PCDHB5Q9Y5E4 795 aa11.94□□□□□ -0.5
HERC1-204ENST00000559715 ATRXP46100 2492 aa11.94□□□□□ -0.5
HERC1-204ENST00000559715 PTPRJQ12913 1337 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 A0A087X0B3 334 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 FRMD3A2A2Y4 597 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 RNF40O75150 1001 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 RPP40O75818 363 aaKnown RBP11.93□□□□□ -0.5
HERC1-204ENST00000559715 ACAT1P24752 427 aaKnown RBP11.93□□□□□ -0.5
HERC1-204ENST00000559715 DDX6P26196 483 aaKnown RBP eCLIP11.93□□□□□ -0.5
HERC1-204ENST00000559715 PMLP29590 882 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 POLR2BP30876 1174 aaKnown RBP11.93□□□□□ -0.5
HERC1-204ENST00000559715 HOXD13P35453 343 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 VEPH1Q14D04 833 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 ZNF77Q15935 545 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 N4BP2L1Q5TBK1 243 aaPredicted RBP11.93□□□□□ -0.5
HERC1-204ENST00000559715 FAM171BQ6P995 826 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 DYMQ7RTS9 669 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 BRSK2Q8IWQ3 736 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 THEM5Q8N1Q8 247 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 HVCN1Q96D96 273 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 ZHX3Q9H4I2 956 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 ABCB6Q9NP58 842 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 THG1LQ9NWX6 298 aaKnown RBP11.93□□□□□ -0.5
HERC1-204ENST00000559715 GDAP2Q9NXN4 497 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 GTF3C4Q9UKN8 822 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 KIF3AQ9Y496 699 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 NME7Q9Y5B8 376 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 CLIC4Q9Y696 253 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 PLXND1Q9Y4D7 1925 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 CELSR3Q9NYQ7 3312 aa11.93□□□□□ -0.5
HERC1-204ENST00000559715 BAHCC1Q9P281 2608 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 H3BQV1 296 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 ATP2C2O75185 946 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 TBCAO75347 108 aaKnown RBP11.92□□□□□ -0.5
HERC1-204ENST00000559715 PRPF40AO75400 957 aaKnown RBP11.92□□□□□ -0.5
HERC1-204ENST00000559715 AKAP3O75969 853 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 IL18RAPO95256 599 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 ITGB3P05106 788 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 CSH1P0DML2 217 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 CSH2P0DML3 217 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 ABCD1P33897 745 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 AVPR1AP37288 418 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 MESP2Q0VG99 397 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 USP4Q13107 963 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 NFE2Q16621 373 aaPredicted RBP11.92□□□□□ -0.5
HERC1-204ENST00000559715 SOWAHAQ2M3V2 549 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 EML3Q32P44 896 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 SV2CQ496J9 727 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 PLK5Q496M5 336 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 CFAP221Q4G0U5 840 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 INTS6LQ5JSJ4 861 aaKnown RBP11.92□□□□□ -0.5
HERC1-204ENST00000559715 LARP1BQ659C4 914 aaKnown RBP11.92□□□□□ -0.5
HERC1-204ENST00000559715 CEP68Q76N32 757 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 CACNA2D4Q7Z3S7 1137 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 BRAPQ7Z569 592 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 METTL23Q86XA0 190 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 DCP1BQ8IZD4 617 aaKnown RBP11.92□□□□□ -0.5
HERC1-204ENST00000559715 CAMKK1Q8N5S9 505 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 KBTBD7Q8WVZ9 684 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 POMGNT1Q8WZA1 660 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 SAAL1Q96ER3 474 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 CLIC6Q96NY7 704 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 CBWD1Q9BRT8 395 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 FAM213AQ9BRX8 229 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 LINC00597Q9H2U6 94 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 ECT2Q9H8V3 914 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 KIF9Q9HAQ2 790 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 OLFML3Q9NRN5 406 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 DDX43Q9NXZ2 648 aaKnown RBP11.92□□□□□ -0.5
HERC1-204ENST00000559715 EBF1Q9UH73 591 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 AGAP1Q9UPQ3 857 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 WASF3Q9UPY6 502 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 LOC400499M0QZD8 3231 aa11.92□□□□□ -0.5
HERC1-204ENST00000559715 C2orf78A6NCI8 922 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 DCLK1O15075 740 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 FOXD2O60548 495 aaPredicted RBP11.91□□□□□ -0.5
HERC1-204ENST00000559715 KRT18P05783 430 aaKnown RBP11.91□□□□□ -0.5
HERC1-204ENST00000559715 TCF3P15923 654 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 DRD1P21728 446 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 LMO2P25791 158 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 USP46P62068 366 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 SHC2P98077 582 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 FAM160A1Q05DH4 1040 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 GRSF1Q12849 480 aaKnown RBP eCLIP11.91□□□□□ -0.5
HERC1-204ENST00000559715 MTF1Q14872 753 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 POSTNQ15063 836 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 PDGFRLQ15198 375 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 L1TD1Q5T7N2 865 aaKnown RBP11.91□□□□□ -0.5
HERC1-204ENST00000559715 STPG1Q5TH74 334 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 TCEAL6Q6IPX3 200 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 FAM173BQ6P4H8 233 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 SYT13Q7L8C5 426 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 LRRC52Q8N7C0 313 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms