RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 UBR7Q8N806 425 aa21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 ZNF512Q96ME7 567 aaPredicted RBP21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 NT5C1AQ9BXI3 368 aa21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 VPS16Q9H269 839 aa21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 LIMA1Q9UHB6 759 aaKnown RBP21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 SMTNL1A8MU46 457 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 CLDN5O00501 218 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 PTPRDP23468 1912 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 TBXAS1P24557 533 aaPredicted RBP21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 PON1P27169 355 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 MAGEA11P43364 429 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 EPHB3P54753 998 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 PLD1Q13393 1074 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 DDR2Q16832 855 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 ZNF394Q53GI3 561 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 PAQR9Q6ZVX9 377 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 RRAGAQ7L523 313 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 ADHFE1Q8IWW8 467 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 HS6ST3Q8IZP7 471 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 PPM1KQ8N3J5 372 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 TTC39CQ8N584 583 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 C12orf29Q8N999 325 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 GIPC2Q8TF65 315 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 NECAB3Q96P71 396 aaPredicted RBP21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 CORO1BQ9BR76 489 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 FAM124BQ9H5Z6 455 aaPredicted RBP21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 PRKAG3Q9UGI9 489 aa21.59■■□□□ 1.05
TSPAN3-207ENST00000559494 CLUHO75153 1309 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 LRRC10BA6NIK2 292 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 RHOP08100 348 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 CDK11BP21127 795 aaKnown RBP21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 RAD23BP54727 409 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 APBA1Q02410 837 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 ZP2Q05996 745 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 KCNMA1Q12791 1236 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 SDHAF4Q5VUM1 108 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 TRIM65Q6PJ69 517 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 APTXQ7Z2E3 356 aaKnown RBP21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 DNAJB7Q7Z6W7 309 aaPredicted RBP21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 ELMOD1Q8N336 334 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 SLC4A11Q8NBS3 891 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 GPR152Q8TDT2 470 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 ADAMTS19Q8TE59 1207 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 RPGRIP1Q96KN7 1286 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 KREMEN1Q96MU8 473 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 LRRC3Q9BY71 257 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 ZNF518BQ9C0D4 1074 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 CBX8Q9HC52 389 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 ASB3Q9Y575 518 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 DOCK8Q8NF50 2099 aa21.58■■□□□ 1.05
TSPAN3-207ENST00000559494 MYO10Q9HD67 2058 aa21.58■■□□□ 1.04
TSPAN3-207ENST00000559494 PES1O00541 588 aaKnown RBP21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 ATP1A3P13637 1013 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 ACO1P21399 889 aaKnown RBP21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 COPB1P53618 953 aaKnown RBP21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 CACNA2D1P54289 1103 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 GCNT1Q02742 428 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 PABPC1LQ4VXU2 614 aaKnown RBP21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 IQCEQ6IPM2 695 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 DPY19L2P1Q6NXN4 242 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 GJB7Q6PEY0 223 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 VSTM1Q6UX27 236 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 SCN4BQ8IWT1 228 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 FUKQ8N0W3 1084 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 SIX2Q9NPC8 291 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 UBE2TQ9NPD8 197 aaPredicted RBP21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 AVENQ9NQS1 362 aaPredicted RBP21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 TMEM30AQ9NV96 361 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 DENND4AQ7Z401 1863 aa21.57■■□□□ 1.04
TSPAN3-207ENST00000559494 C19orf67A6NJJ6 358 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 LOC730098B7Z3J9 87 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 CCDC130P13994 396 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 SP100P23497 879 aaPredicted RBP21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 FSHRP23945 695 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 YWHAEP62258 255 aaKnown RBP21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 RPL10AP62906 217 aaKnown RBP21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 STKLD1Q8NE28 680 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 ITFG1Q8TB96 612 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 FAM200AQ8TCP9 573 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 PSMG2Q969U7 264 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 TMEM176AQ96HP8 235 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 HEXIM2Q96MH2 286 aaKnown RBP21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 MED10Q9BTT4 135 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 CD320Q9NPF0 282 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 FAM49BQ9NUQ9 324 aa21.56■■□□□ 1.04
TSPAN3-207ENST00000559494 RNF225M0QZC1 329 aaPredicted RBP21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 NRG2O14511 850 aaPredicted RBP21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 GRIK1P39086 918 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 CCR2P41597 374 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 EPHA5P54756 1037 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 SLC5A9Q2M3M2 681 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 PRSS36Q5K4E3 855 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 FAM35AQ86V20 835 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 TMC8Q8IU68 726 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 SLC2A14Q8TDB8 520 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 TCEAL4Q96EI5 215 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 CYFIP2Q96F07 1278 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 MYADMQ96S97 322 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 HNRNPABQ99729 332 aaKnown RBP21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 ZNF334Q9HCZ1 680 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms