RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SDHAF4Q5VUM1 108 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 PHLDB3Q6NSJ2 640 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 SCARA5Q6ZMJ2 495 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 C4orf50Q6ZRC1 276 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 INTS8Q75QN2 995 aaKnown RBP11.7□□□□□ -0.54
SPG11-216ENST00000559347 TMEM150AQ86TG1 271 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 FAM186BQ8IYM0 893 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 DEPDC1BQ8WUY9 529 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 SMARCE1Q969G3 411 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 ELMO3Q96BJ8 720 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 RSPRY1Q96DX4 576 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 TRMT2BQ96GJ1 504 aaKnown RBP11.7□□□□□ -0.54
SPG11-216ENST00000559347 GCNAQ96QF7 691 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 SNX25Q9H3E2 840 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 ATXN3LQ9H3M9 355 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 DPEP3Q9H4B8 488 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 NXF1Q9UBU9 619 aaKnown RBP11.7□□□□□ -0.54
SPG11-216ENST00000559347 PCDHA5Q9Y5H7 936 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 FANCMQ8IYD8 2048 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 FRYLO94915 3013 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 KIAA1549LQ6ZVL6 1849 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 CACNA1HO95180 2353 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 IKBKBO14920 756 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
SPG11-216ENST00000559347 PI15O43692 258 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 KINO60870 393 aaKnown RBP11.69□□□□□ -0.54
SPG11-216ENST00000559347 GADD45BO75293 160 aaPredicted RBP11.69□□□□□ -0.54
SPG11-216ENST00000559347 NOL4O94818 638 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 CLSTN1O94985 981 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 SMC2O95347 1197 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 PRAMEF12O95522 483 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 PDGFRBP09619 1106 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 FAM163BP0C2L3 166 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 CSH1P0DML2 217 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 CSH2P0DML3 217 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 PSMC3P17980 439 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 RFX1P22670 979 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 RPL13P26373 211 aaKnown RBP11.69□□□□□ -0.54
SPG11-216ENST00000559347 PIK3CAP42336 1068 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 PRCPP42785 496 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 RAP1GAPP47736 663 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 VAMP7P51809 220 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 PTPN5P54829 565 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 NLRP12P59046 1061 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 STARD6P59095 220 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 PRKCQQ04759 706 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 MAPRE1Q15691 268 aaKnown RBP11.69□□□□□ -0.54
SPG11-216ENST00000559347 TAF12Q16514 161 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 DDR2Q16832 855 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 ARHGAP15Q53QZ3 475 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 ZNF667Q5HYK9 610 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 MDH1BQ5I0G3 518 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 GPR158Q5T848 1215 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 SV2AQ7L0J3 742 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 ZC3H3Q8IXZ2 948 aaKnown RBP11.69□□□□□ -0.54
SPG11-216ENST00000559347 ELOA2Q8IYF1 753 aaPredicted RBP11.69□□□□□ -0.54
SPG11-216ENST00000559347 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 MYCBPAPQ8TBZ2 947 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 DNASE1L2Q92874 299 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 PCED1BQ96HM7 432 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 DDX23Q9BUQ8 820 aaKnown RBP11.69□□□□□ -0.54
SPG11-216ENST00000559347 SDCBP2Q9H190 292 aa11.69□□□□□ -0.54
SPG11-216ENST00000559347 HOOK1Q9UJC3 728 aaKnown RBP11.69□□□□□ -0.54
SPG11-216ENST00000559347 SLC38A8A6NNN8 435 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 HEPACAM2A8MVW5 462 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 A8MXQ7 604 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 ARNTLO00327 626 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 ASS1P00966 412 aaKnown RBP11.68□□□□□ -0.54
SPG11-216ENST00000559347 HLA-DRAP01903 254 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 F11P03951 625 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 KRT13P13646 458 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 BDNFP23560 247 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 WEE1P30291 646 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 PSMC2P35998 433 aaKnown RBP11.68□□□□□ -0.54
SPG11-216ENST00000559347 GNL1P36915 607 aaPredicted RBP11.68□□□□□ -0.54
SPG11-216ENST00000559347 ASPAP45381 313 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 CDH8P55286 799 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 MCCD1P59942 119 aaPredicted RBP11.68□□□□□ -0.54
SPG11-216ENST00000559347 CYP27A1Q02318 531 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 PPP3CAQ08209 521 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 FCHO2Q0JRZ9 810 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 ADAM9Q13443 819 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 VSTM1Q6UX27 236 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 ARID3BQ8IVW6 561 aaPredicted RBP11.68□□□□□ -0.54
SPG11-216ENST00000559347 MFSD6LQ8IWD5 586 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 SCN4BQ8IWT1 228 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 CCDC105Q8IYK2 499 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 B3GALNT2Q8NCR0 500 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 PJA1Q8NG27 643 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 TAF4BQ92750 862 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 E2F7Q96AV8 911 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 MYRFLQ96LU7 910 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 TRMT61BQ9BVS5 477 aaKnown RBP11.68□□□□□ -0.54
SPG11-216ENST00000559347 FOXQ1Q9C009 403 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 TASP1Q9H6P5 420 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 BRD9Q9H8M2 597 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 HEBP1Q9NRV9 189 aa11.68□□□□□ -0.54
SPG11-216ENST00000559347 MAGEC2Q9UBF1 373 aaPredicted RBP11.68□□□□□ -0.54
SPG11-216ENST00000559347 UXTQ9UBK9 157 aaPredicted RBP11.68□□□□□ -0.54
SPG11-216ENST00000559347 MAGED2Q9UNF1 606 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms