RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 ANXA13P27216 316 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 GNA15P30679 374 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 KRT9P35527 623 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 ALDH1A3P47895 512 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 NRIP1P48552 1158 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 PDE6CP51160 858 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 CLCN4P51793 760 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 ZNF132P52740 706 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 JAM2P57087 298 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 PSMC1P62191 440 aaKnown RBP9.8□□□□□ -0.84
LDLR-210ENST00000559340 ADCY1Q08828 1119 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 CNGA2Q16280 664 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 ASIC2Q16515 512 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 MEA1Q16626 185 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 CFAP221Q4G0U5 840 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 ARHGAP17Q68EM7 881 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 PPP1R2P3Q6NXS1 205 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 RBM23Q86U06 439 aaKnown RBP9.8□□□□□ -0.84
LDLR-210ENST00000559340 VPS36Q86VN1 386 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 CNGA4Q8IV77 575 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 TCEAL8Q8IYN2 117 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 ELMOD1Q8N336 334 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 EFHBQ8N7U6 833 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 KREMEN2Q8NCW0 462 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 OR8K1Q8NGG5 319 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 WHAMMQ8TF30 809 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 SLC22A17Q8WUG5 538 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 CPLX3Q8WVH0 158 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 SMARCD1Q96GM5 515 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 IGFLR1Q9H665 355 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 CYP4F11Q9HBI6 524 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 ABI2Q9NYB9 513 aaPredicted RBP9.8□□□□□ -0.84
LDLR-210ENST00000559340 DOCK6Q96HP0 2047 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 DENND4CQ5VZ89 1909 aa9.8□□□□□ -0.84
LDLR-210ENST00000559340 WDR27A2RRH5 827 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 MTMR11A4FU01 709 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 AKR1B15C9JRZ8 316 aaPredicted RBP9.79□□□□□ -0.84
LDLR-210ENST00000559340 RNF225M0QZC1 329 aaPredicted RBP9.79□□□□□ -0.84
LDLR-210ENST00000559340 PER2O15055 1255 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 TGM5O43548 720 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 ATP2C2O75185 946 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 GFPT2O94808 682 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 LRG1P02750 347 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 HNRNPA1P09651 372 aaKnown RBP eCLIP9.79□□□□□ -0.84
LDLR-210ENST00000559340 OR4Q2P0C623 313 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 FAM200BP0CF97 657 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 HAPLN1P10915 354 aaPredicted RBP9.79□□□□□ -0.84
LDLR-210ENST00000559340 HOXB8P17481 243 aaPredicted RBP9.79□□□□□ -0.84
LDLR-210ENST00000559340 GRIK1P39086 918 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 EPHB3P54753 998 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 APBA1Q02410 837 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 VEPH1Q14D04 833 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 TAF12Q16514 161 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 MGAT5BQ3V5L5 792 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 TCEAL5Q5H9L2 206 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 PPM1LQ5SGD2 360 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 LILRA6Q6PI73 481 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 LCLAT1Q6UWP7 414 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 RSPO2Q6UXX9 243 aaPredicted RBP9.79□□□□□ -0.84
LDLR-210ENST00000559340 CYP26C1Q6V0L0 522 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 TMEM184AQ6ZMB5 413 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 TRIM72Q6ZMU5 477 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 RNF19BQ6ZMZ0 732 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 ITIH5Q86UX2 942 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 LRRTM3Q86VH5 581 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 ANKRD52Q8NB46 1076 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 MSANTD4Q8NCY6 345 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 ATXN2LQ8WWM7 1075 aaKnown RBP9.79□□□□□ -0.84
LDLR-210ENST00000559340 ZNF606Q8WXB4 792 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 MYLPFQ96A32 169 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 PCED1BQ96HM7 432 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 NOX5Q96PH1 765 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 TMEM209Q96SK2 561 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 B3GNT5Q9BYG0 378 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 UBXN6Q9BZV1 441 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 TTYH3Q9C0H2 523 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 DPEP3Q9H4B8 488 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 CRTAC1Q9NQ79 661 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 COMMD8Q9NX08 183 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 AIPL1Q9NZN9 384 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 FBXW11Q9UKB1 542 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 ASB3Q9Y575 518 aa9.79□□□□□ -0.84
LDLR-210ENST00000559340 LRRC53A6NM62 1247 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 TNFRSF10AO00220 468 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 EPHB6O15197 1021 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 ADAM12O43184 909 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 AP5Z1O43299 807 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 NRDCO43847 1150 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 XYLBO75191 536 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 ZMYND10O75800 440 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 AP1G2O75843 785 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 SETSIPP0DME0 302 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 CYP11B1P15538 503 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 TNFAIP3P21580 790 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 BDNFP23560 247 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 ADORA2BP29275 332 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 HOXA9P31269 272 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 CASP14P31944 242 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 CLCN1P35523 988 aa9.78□□□□□ -0.84
LDLR-210ENST00000559340 BCAT1P54687 386 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms