RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 AFF4Q9UHB7 1163 aaKnown RBP6.31□□□□□ -1.4
USP3-212ENST00000559276 ADAM21Q9UKJ8 722 aa6.31□□□□□ -1.4
USP3-212ENST00000559276 NFE2L3Q9Y4A8 694 aa6.31□□□□□ -1.4
USP3-212ENST00000559276 YIPF1Q9Y548 306 aa6.31□□□□□ -1.4
USP3-212ENST00000559276 PCDHGA2Q9Y5H1 932 aa6.31□□□□□ -1.4
USP3-212ENST00000559276 PCDHA5Q9Y5H7 936 aa6.31□□□□□ -1.4
USP3-212ENST00000559276 SRPRBQ9Y5M8 271 aaKnown RBP6.31□□□□□ -1.4
USP3-212ENST00000559276 ADGRG1Q9Y653 693 aa6.31□□□□□ -1.4
USP3-212ENST00000559276 SCN1AP35498 2009 aa6.31□□□□□ -1.4
USP3-212ENST00000559276 A0A1W2PRU2 124 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 CTAGE15A4D2H0 777 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 HEPACAM2A8MVW5 462 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 TISP43B9A030 160 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 POLR3GO15318 223 aaPredicted RBP6.3□□□□□ -1.4
USP3-212ENST00000559276 MFAP3LO75121 409 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 SOAT2O75908 522 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 SASH3O75995 380 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 PIGRP01833 764 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 PLA2G4BP0C869 781 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 CTAGE8P0CG41 777 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 MYL4P12829 197 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 PSMC3P17980 439 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 CYP3A5P20815 502 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 GDI1P31150 447 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 ELF1P32519 619 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 PBX1P40424 430 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 SOX9P48436 509 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 CDR1P51861 262 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 ZNF131P52739 623 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 ATXN1P54253 815 aaKnown RBP6.3□□□□□ -1.4
USP3-212ENST00000559276 SATB1Q01826 763 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 CKAP4Q07065 602 aaKnown RBP6.3□□□□□ -1.4
USP3-212ENST00000559276 FCHO2Q0JRZ9 810 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 DUSP4Q13115 394 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 GPR17Q13304 367 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 PNOCQ13519 176 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 PUM1Q14671 1186 aaKnown RBP eCLIP6.3□□□□□ -1.4
USP3-212ENST00000559276 CDKAL1Q5VV42 579 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 SCARA3Q6AZY7 606 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 CENPPQ6IPU0 288 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 ZNF280DQ6N043 979 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 TXNDC11Q6PKC3 985 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 GAREM2Q75VX8 874 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 PDZD4Q76G19 769 aaPredicted RBP6.3□□□□□ -1.4
USP3-212ENST00000559276 DGLUCYQ7Z3D6 616 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 HAUS6Q7Z4H7 955 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 APBB1IPQ7Z5R6 666 aaPredicted RBP6.3□□□□□ -1.4
USP3-212ENST00000559276 SRLQ86TD4 932 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 CTAGE6Q86UF2 777 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 GPIHBP1Q8IV16 184 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 MFSD6LQ8IWD5 586 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 CTAGE4Q8IX94 777 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 OR10T2Q8NGX3 314 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 FAM3CQ92520 227 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 DHX58Q96C10 678 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 CHFRQ96EP1 664 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 BORCS6Q96GS4 357 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 ZNF512Q96ME7 567 aaPredicted RBP6.3□□□□□ -1.4
USP3-212ENST00000559276 PGLYRP2Q96PD5 576 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 NAPGQ99747 312 aaPredicted RBP6.3□□□□□ -1.4
USP3-212ENST00000559276 REEP2Q9BRK0 252 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 TIPINQ9BVW5 301 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 BRD9Q9H8M2 597 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 LMAN1LQ9HAT1 526 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 PLEKHA5Q9HAU0 1116 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 IL21Q9HBE4 155 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 ST7Q9NRC1 585 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 BLOC1S4Q9NUP1 217 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 CPSF3Q9UKF6 684 aaKnown RBP6.3□□□□□ -1.4
USP3-212ENST00000559276 MAN1B1Q9UKM7 699 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 MAFFQ9ULX9 164 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 NDRG2Q9UN36 371 aaKnown RBP6.3□□□□□ -1.4
USP3-212ENST00000559276 L1RE1Q9UN81 338 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 SMG5Q9UPR3 1016 aaKnown RBP6.3□□□□□ -1.4
USP3-212ENST00000559276 SLC27A5Q9Y2P5 690 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 NUB1Q9Y5A7 615 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 STK24Q9Y6E0 443 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 PIAS3Q9Y6X2 628 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 NCOR2Q9Y618 2525 aa6.3□□□□□ -1.4
USP3-212ENST00000559276 EML5Q05BV3 1969 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 A0A0B4J269 797 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 ANO9A1A5B4 782 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 MTMR11A4FU01 709 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 LRRC10BA6NIK2 292 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 ANKRD63C9JTQ0 380 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 K7ESF4 209 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 MYO1CO00159 1063 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 PIRO00625 290 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 ZNF197O14709 1029 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 FANCGO15287 622 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 CLDN3O15551 220 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 HRO43593 1189 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 PRAMEF12O95522 483 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 CPP00450 1065 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 MYL1P05976 194 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 NFICP08651 508 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 CLTAP09496 248 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 CPB1P15086 417 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 ATF6P18850 670 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 TYMPP19971 482 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms