RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 CCDC142Q17RM4 750 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 WDR72Q3MJ13 1102 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 ZNF852Q6ZMS4 543 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 C4orf50Q6ZRC1 276 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 TPRG1Q6ZUI0 275 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 SYAP1Q96A49 352 aaPredicted RBP16.58■□□□□ 0.24
CSHL1-208ENST00000558609 MRPL45Q9BRJ2 306 aaKnown RBP16.58■□□□□ 0.24
CSHL1-208ENST00000558609 VRTNQ9H8Y1 702 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 LTB4R2Q9NPC1 389 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 CRTAC1Q9NQ79 661 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 MTF2Q9Y483 593 aaPredicted RBP16.58■□□□□ 0.24
CSHL1-208ENST00000558609 RIF1Q5UIP0 2472 aaKnown RBP16.58■□□□□ 0.24
CSHL1-208ENST00000558609 COL4A3Q01955 1670 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 FAM170BA6NMN3 283 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 SOBPA7XYQ1 873 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 ARNTLO00327 626 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 CHADO15335 359 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 CALUO43852 315 aaPredicted RBP16.57■□□□□ 0.24
CSHL1-208ENST00000558609 PHACTR2O75167 634 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 LRRN2O75325 713 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 NOL4O94818 638 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 C4BPAP04003 597 aaKnown RBP16.57■□□□□ 0.24
CSHL1-208ENST00000558609 PDGFRBP09619 1106 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 CD72P21854 359 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 DDX6P26196 483 aaKnown RBP eCLIP16.57■□□□□ 0.24
CSHL1-208ENST00000558609 MLLT6P55198 1093 aaPredicted RBP16.57■□□□□ 0.24
CSHL1-208ENST00000558609 TNNC1P63316 161 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 CYP4F8P98187 520 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 UBXN2BQ14CS0 331 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 NFIL3Q16649 462 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 SDHAF4Q5VUM1 108 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 TDRD10Q5VZ19 366 aaKnown RBP16.57■□□□□ 0.24
CSHL1-208ENST00000558609 GUF1Q8N442 669 aaKnown RBP16.57■□□□□ 0.24
CSHL1-208ENST00000558609 TMC2Q8TDI7 906 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 TRMT2BQ96GJ1 504 aaKnown RBP16.57■□□□□ 0.24
CSHL1-208ENST00000558609 CCDC34Q96HJ3 373 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 MYRFLQ96LU7 910 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 LRRC3BQ96PB8 259 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 SLC46A2Q9BY10 475 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 SNX25Q9H3E2 840 aa16.57■□□□□ 0.24
CSHL1-208ENST00000558609 MAGEC2Q9UBF1 373 aaPredicted RBP16.57■□□□□ 0.24
CSHL1-208ENST00000558609 UXTQ9UBK9 157 aaPredicted RBP16.57■□□□□ 0.24
CSHL1-208ENST00000558609 MRPS17Q9Y2R5 130 aaKnown RBP16.57■□□□□ 0.24
CSHL1-208ENST00000558609 SLC38A8A6NNN8 435 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 MAN2B1O00754 1011 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 DPYSL4O14531 572 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 IKBKBO14920 756 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 MAPK13O15264 365 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 MAGEA9P43362 315 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 PSMC1P62191 440 aaKnown RBP16.56■□□□□ 0.24
CSHL1-208ENST00000558609 DLG4P78352 724 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 BIRC3Q13489 604 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 VSTM1Q6UX27 236 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 GPIHBP1Q8IV16 184 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 C1orf210Q8IVY1 113 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 YAF2Q8IY57 180 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 CMTM8Q8IZV2 173 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 FMR1NBQ8N0W7 255 aaPredicted RBP16.56■□□□□ 0.24
CSHL1-208ENST00000558609 MYCBPAPQ8TBZ2 947 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 MYLPFQ96A32 169 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 CLDN23Q96B33 292 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 CEP295NLQ96MC4 621 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 BCO2Q9BYV7 579 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 MAGED2Q9UNF1 606 aaPredicted RBP16.56■□□□□ 0.24
CSHL1-208ENST00000558609 FRMD4BQ9Y2L6 1034 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 NME7Q9Y5B8 376 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 MIA3Q5JRA6 1907 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 NUP210Q8TEM1 1887 aaPredicted RBP16.56■□□□□ 0.24
CSHL1-208ENST00000558609 COL4A2P08572 1712 aa16.56■□□□□ 0.24
CSHL1-208ENST00000558609 CACNA1IQ9P0X4 2223 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 DENND4CQ5VZ89 1909 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 NCAM2O15394 837 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 PRAMEF12O95522 483 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 TARSP26639 723 aaKnown RBP16.55■□□□□ 0.24
CSHL1-208ENST00000558609 RPS9P46781 194 aaKnown RBP16.55■□□□□ 0.24
CSHL1-208ENST00000558609 FZD5Q13467 585 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 NCOA4Q13772 614 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 ZACNQ401N2 412 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 ARHGAP29Q52LW3 1261 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 CEP135Q66GS9 1140 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 FRMD5Q7Z6J6 570 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 MON1AQ86VX9 555 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 SCN4BQ8IWT1 228 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 ZNF687Q8N1G0 1237 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 CELF5Q8N6W0 485 aaKnown RBP16.55■□□□□ 0.24
CSHL1-208ENST00000558609 STKLD1Q8NE28 680 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 OR6B3Q8NGW1 331 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 MRPS31Q92665 395 aaKnown RBP16.55■□□□□ 0.24
CSHL1-208ENST00000558609 PCED1BQ96HM7 432 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 SPATA17Q96L03 361 aa16.55■□□□□ 0.24
CSHL1-208ENST00000558609 NXF1Q9UBU9 619 aaKnown RBP16.55■□□□□ 0.24
CSHL1-208ENST00000558609 GOLGA6L4A6NEF3 574 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 VNN1O95497 513 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 PTPN1P18031 435 aaKnown RBP16.54■□□□□ 0.24
CSHL1-208ENST00000558609 BDNFP23560 247 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 ZNF699Q32M78 642 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 ZNF667Q5HYK9 610 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 C1orf220Q5T0J3 134 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 SV2AQ7L0J3 742 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 MAB21L3Q8N8X9 362 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms