RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 TOP6BLQ8N6T0 577 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 USP13Q92995 863 aaPredicted RBP16.66■□□□□ 0.26
TPM1-211ENST00000558314 CCDC127Q96BQ5 260 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 SYT15Q9BQS2 421 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 FAM126AQ9BYI3 521 aaPredicted RBP16.66■□□□□ 0.26
TPM1-211ENST00000558314 EPC1Q9H2F5 836 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 TDP1Q9NUW8 608 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 KBTBD4Q9NVX7 518 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 FANCMQ8IYD8 2048 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 YEATS4O95619 227 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 CKMP06732 381 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 ARSAP15289 507 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 LMO2P25791 158 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 FOXK2Q01167 660 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 SURF1Q15526 300 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 RSPO4Q2I0M5 234 aaPredicted RBP16.65■□□□□ 0.26
TPM1-211ENST00000558314 WDR44Q5JSH3 913 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 ERMP1Q7Z2K6 904 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 CXorf38Q8TB03 319 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 FNBP1Q96RU3 617 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 CYP2S1Q96SQ9 504 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 IER2Q9BTL4 223 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 SNX25Q9H3E2 840 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 CUEDC2Q9H467 287 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 C2orf42Q9NWW7 574 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 GDAP2Q9NXN4 497 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 MAGEC2Q9UBF1 373 aaPredicted RBP16.65■□□□□ 0.26
TPM1-211ENST00000558314 UXTQ9UBK9 157 aaPredicted RBP16.65■□□□□ 0.26
TPM1-211ENST00000558314 MORC2Q9Y6X9 1032 aaPredicted RBP16.65■□□□□ 0.26
TPM1-211ENST00000558314 OTOGLQ3ZCN5 2332 aa16.65■□□□□ 0.26
TPM1-211ENST00000558314 KIAA0391O15091 583 aaKnown RBP16.64■□□□□ 0.25
TPM1-211ENST00000558314 TDGF1P13385 188 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 BDNFP23560 247 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 DDX6P26196 483 aaKnown RBP eCLIP16.64■□□□□ 0.25
TPM1-211ENST00000558314 HOXC13P31276 330 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 HOXD13P35453 343 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 GRIK1P39086 918 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 MLLT6P55198 1093 aaPredicted RBP16.64■□□□□ 0.25
TPM1-211ENST00000558314 RUNX3Q13761 415 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 SIM2Q14190 667 aaPredicted RBP16.64■□□□□ 0.25
TPM1-211ENST00000558314 SNRNP35Q16560 246 aaKnown RBP16.64■□□□□ 0.25
TPM1-211ENST00000558314 C4orf50Q6ZRC1 276 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 CEP68Q76N32 757 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 MON1AQ86VX9 555 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 LEO1Q8WVC0 666 aaPredicted RBP16.64■□□□□ 0.25
TPM1-211ENST00000558314 NELL1Q92832 810 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 MYLPFQ96A32 169 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 SLC39A2Q9NP94 309 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 AGPAT3Q9NRZ7 376 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 FAM13BQ9NYF5 915 aa16.64■□□□□ 0.25
TPM1-211ENST00000558314 NUP210Q8TEM1 1887 aaPredicted RBP16.63■□□□□ 0.25
TPM1-211ENST00000558314 TRAV19A0A0A6YYK7 116 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 EIF3DO15371 548 aaKnown RBP eCLIP16.63■□□□□ 0.25
TPM1-211ENST00000558314 ZSCAN22P10073 491 aaPredicted RBP16.63■□□□□ 0.25
TPM1-211ENST00000558314 ANXA13P27216 316 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 WEE1P30291 646 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 PXNP49023 591 aaPredicted RBP16.63■□□□□ 0.25
TPM1-211ENST00000558314 SPEM2Q0P670 501 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 GRSF1Q12849 480 aaKnown RBP eCLIP16.63■□□□□ 0.25
TPM1-211ENST00000558314 IFRD2Q12894 506 aaPredicted RBP16.63■□□□□ 0.25
TPM1-211ENST00000558314 HS2ST1Q7LGA3 356 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 TRAPPC11Q7Z392 1133 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.63■□□□□ 0.25
TPM1-211ENST00000558314 WDR49Q8IV35 697 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 GRAMD1CQ8IYS0 662 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 OR6B3Q8NGW1 331 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 KIF9Q9HAQ2 790 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 KIAA1586Q9HCI6 787 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 ABCB6Q9NP58 842 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 HPS4Q9NQG7 708 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 CDH9Q9ULB4 789 aa16.63■□□□□ 0.25
TPM1-211ENST00000558314 PHACTR2O75167 634 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 TADA3O75528 432 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 NOL4O94818 638 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 F13A1P00488 732 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 ABL1P00519 1130 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 IFNAR2P48551 515 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 TNNC1P63316 161 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 PSMD2Q13200 908 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 TRPC3Q13507 836 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 PUM1Q14671 1186 aaKnown RBP eCLIP16.62■□□□□ 0.255e-9■□□□□ 8.1
TPM1-211ENST00000558314 KCNB1Q14721 858 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 MDH1BQ5I0G3 518 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 UNC13DQ70J99 1090 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 ARL14EPQ8N8R7 260 aaPredicted RBP16.62■□□□□ 0.25
TPM1-211ENST00000558314 FSIP1Q8NA03 581 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 XXYLT1Q8NBI6 393 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 RIN3Q8TB24 985 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 ZNF507Q8TCN5 953 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 KBTBD7Q8WVZ9 684 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 SLC22A12Q96S37 553 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 PKMYT1Q99640 499 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 CGRRF1Q99675 332 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 C7orf25Q9BPX7 421 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 FAM83CQ9BQN1 747 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 MRPL45Q9BRJ2 306 aaKnown RBP16.62■□□□□ 0.25
TPM1-211ENST00000558314 CRTAC1Q9NQ79 661 aa16.62■□□□□ 0.25
TPM1-211ENST00000558314 DUS2Q9NX74 493 aaKnown RBP16.62■□□□□ 0.25
TPM1-211ENST00000558314 NXF1Q9UBU9 619 aaKnown RBP16.62■□□□□ 0.25
TPM1-211ENST00000558314 ZMYM5Q9UJ78 669 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms