RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 VCX3BQ9H321 246 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 VCX3AQ9NNX9 186 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 TYW1Q9NV66 732 aaKnown RBP8.51□□□□□ -1.05
RTF1-205ENST00000558298 EXOC1Q9NV70 894 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 CTTNBP2NLQ9P2B4 639 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 SERTAD1Q9UHV2 236 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 SLC12A6Q9UHW9 1150 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 ITGB1BP2Q9UKP3 347 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 COG5Q9UP83 839 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 PLAGL2Q9UPG8 496 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 PCDHB12Q9Y5F1 795 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 BDP1A6H8Y1 2624 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 NCOR1O75376 2440 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 VWA8A3KMH1 1905 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 TTC26A0AVF1 554 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 BTNL10A8MVZ5 291 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 PPP1R3GB7ZBB8 358 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 PTGESO14684 152 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 FSCN2O14926 492 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 NCK2O43639 380 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 B4GALT3O60512 393 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 ANP32DO95626 131 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 CLTAP09496 248 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 CYP3A5P20815 502 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 ATP5DP30049 168 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 NMT1P30419 496 aaKnown RBP8.5□□□□□ -1.05
RTF1-205ENST00000558298 MLH1P40692 756 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 LIG4P49917 911 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 RASSF2P50749 326 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 PDE6CP51160 858 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 CASP5P51878 434 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 CCNHP51946 323 aaPredicted RBP8.5□□□□□ -1.05
RTF1-205ENST00000558298 MCCD1P59942 119 aaPredicted RBP8.5□□□□□ -1.05
RTF1-205ENST00000558298 ASIC1P78348 528 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 TFF2Q03403 129 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 ENPEPQ07075 957 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 SFSWAPQ12872 951 aaKnown RBP8.5□□□□□ -1.05
RTF1-205ENST00000558298 TUSC3Q13454 348 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 MYBPC2Q14324 1141 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 PPP1R7Q15435 360 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 SPDYAQ5MJ70 313 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 KCNT2Q6UVM3 1135 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 TAOK1Q7L7X3 1001 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 SCFD1Q8WVM8 642 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 RIN2Q8WYP3 895 aaPredicted RBP8.5□□□□□ -1.05
RTF1-205ENST00000558298 TAF4BQ92750 862 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 GRAMD1AQ96CP6 724 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 CAPZA3Q96KX2 299 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 FBXL18Q96ME1 805 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 UROC1Q96N76 676 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 PPP1R10Q96QC0 940 aaKnown RBP8.5□□□□□ -1.05
RTF1-205ENST00000558298 ACCSQ96QU6 501 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 ERGIC2Q96RQ1 377 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 GAD1Q99259 594 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 NAP1L3Q99457 506 aaPredicted RBP8.5□□□□□ -1.05
RTF1-205ENST00000558298 HAPLN2Q9GZV7 340 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 RNF39Q9H2S5 420 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 ASB7Q9H672 318 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 NRDE2Q9H7Z3 1164 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 NHEJ1Q9H9Q4 299 aaPredicted RBP8.5□□□□□ -1.05
RTF1-205ENST00000558298 SLC24A3Q9HC58 644 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 PAPOLBQ9NRJ5 636 aaKnown RBP8.5□□□□□ -1.05
RTF1-205ENST00000558298 FAM114A2Q9NRY5 505 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 SLC38A7Q9NVC3 462 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 ZFATQ9P243 1243 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 CPSF3Q9UKF6 684 aaKnown RBP8.5□□□□□ -1.05
RTF1-205ENST00000558298 DERAQ9Y315 318 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 C2CD2Q9Y426 696 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 TSC2P49815 1807 aa8.5□□□□□ -1.05
RTF1-205ENST00000558298 MTCL1Q9Y4B5 1905 aaKnown RBP8.49□□□□□ -1.05
RTF1-205ENST00000558298 ZNF233A6NK53 670 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 PPFIA2O75334 1257 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 FGF18O76093 207 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 GCNT3O95395 438 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 PAPLNO95428 1278 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 LDHAP00338 332 aaKnown RBP8.49□□□□□ -1.05
RTF1-205ENST00000558298 THP07101 528 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 GALTP07902 379 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 ADSSP30520 456 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 IRS1P35568 1242 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 LTBRP36941 435 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 ALDH7A1P49419 539 aaKnown RBP8.49□□□□□ -1.05
RTF1-205ENST00000558298 YARSP54577 528 aaKnown RBP8.49□□□□□ -1.05
RTF1-205ENST00000558298 BCAR1P56945 870 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 MRPS5P82675 430 aaKnown RBP8.49□□□□□ -1.05
RTF1-205ENST00000558298 GUCY1A3Q02108 690 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 CCDC15Q0P6D6 951 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 MYO1EQ12965 1108 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 CUL3Q13618 768 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 KCNC3Q14003 757 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 ZBTB6Q15916 424 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 SKIDA1Q1XH10 827 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 VWA3BQ502W6 1294 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 PAN2Q504Q3 1202 aaKnown RBP8.49□□□□□ -1.05
RTF1-205ENST00000558298 LRRC23Q53EV4 343 aaPredicted RBP8.49□□□□□ -1.05
RTF1-205ENST00000558298 TCEAL5Q5H9L2 206 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 NUGGCQ68CJ6 796 aa8.49□□□□□ -1.05
RTF1-205ENST00000558298 HIBCHQ6NVY1 386 aaPredicted RBP8.49□□□□□ -1.05
RTF1-205ENST00000558298 DDX53Q86TM3 631 aaKnown RBP8.49□□□□□ -1.05
RTF1-205ENST00000558298 SLC9A9Q8IVB4 645 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms