RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 DLGAP2Q9P1A6 1054 aa10.85□□□□□ -0.67
USP3-207ENST00000558218 L1RE1Q9UN81 338 aa10.85□□□□□ -0.67
USP3-207ENST00000558218 SNX9Q9Y5X1 595 aa10.85□□□□□ -0.67
USP3-207ENST00000558218 A0A1B0GVL5 298 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 A0A1W2PRU2 124 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 PDXKO00764 312 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 CHADO15335 359 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 KLRC4O43908 158 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 TACC1O75410 805 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 CSH1P0DML2 217 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 CSH2P0DML3 217 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 PFKFB1P16118 471 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 TNNI1P19237 187 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 GABRR2P28476 465 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 ATICP31939 592 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 MAGEA11P43364 429 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 SYKP43405 635 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 RPS9P46781 194 aaKnown RBP10.84□□□□□ -0.67
USP3-207ENST00000558218 CLDN10P78369 228 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 CYP24A1Q07973 514 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 FCHO2Q0JRZ9 810 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 BFSP1Q12934 665 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 STK4Q13043 487 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 TEAD2Q15562 447 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 SOWAHAQ2M3V2 549 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 INTS6LQ5JSJ4 861 aaKnown RBP10.84□□□□□ -0.67
USP3-207ENST00000558218 FAM171BQ6P995 826 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 ZNF852Q6ZMS4 543 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 GAREM2Q75VX8 874 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 OR5B17Q8NGF7 314 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 FAM200AQ8TCP9 573 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 NOC3LQ8WTT2 800 aaKnown RBP10.84□□□□□ -0.67
USP3-207ENST00000558218 CLDN23Q96B33 292 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 MYRFLQ96LU7 910 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 PKMYT1Q99640 499 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 SEPT5Q99719 369 aaPredicted RBP10.84□□□□□ -0.67
USP3-207ENST00000558218 IER2Q9BTL4 223 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 BCO2Q9BYV7 579 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 ATXN3LQ9H3M9 355 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 TASP1Q9H6P5 420 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 ZNF334Q9HCZ1 680 aaPredicted RBP10.84□□□□□ -0.67
USP3-207ENST00000558218 EXOC1Q9NV70 894 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 DMAC2Q9NW81 257 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 UXTQ9UBK9 157 aaPredicted RBP10.84□□□□□ -0.67
USP3-207ENST00000558218 CDH9Q9ULB4 789 aa10.84□□□□□ -0.67
USP3-207ENST00000558218 FAM170BA6NMN3 283 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 IKBKBO14920 756 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 ZNF263O14978 683 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 CLIC2O15247 247 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 EXOC3O60645 756 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 ATF6P18850 670 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 WARSP23381 471 aaKnown RBP10.83□□□□□ -0.68
USP3-207ENST00000558218 NUCB2P80303 420 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 ENPEPQ07075 957 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 ANGPT1Q15389 498 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 ARHGAP29Q52LW3 1261 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 VSTM1Q6UX27 236 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 VITQ6UXI7 678 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 C4orf50Q6ZRC1 276 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 ARID3BQ8IVW6 561 aaPredicted RBP10.83□□□□□ -0.68
USP3-207ENST00000558218 C1orf210Q8IVY1 113 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 SCUBE3Q8IX30 993 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 NELFCDQ8IXH7 590 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 YAF2Q8IY57 180 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 ADGRF2Q8IZF7 708 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 TTC9BQ8N6N2 239 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 ST13P5Q8NFI4 369 aaPredicted RBP10.83□□□□□ -0.68
USP3-207ENST00000558218 CCDC127Q96BQ5 260 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 TRMT2BQ96GJ1 504 aaKnown RBP10.83□□□□□ -0.68
USP3-207ENST00000558218 GCNAQ96QF7 691 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 CGRRF1Q99675 332 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 SLITRK6Q9H5Y7 841 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 VRTNQ9H8Y1 702 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 LTB4R2Q9NPC1 389 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 ABI2Q9NYB9 513 aaPredicted RBP10.83□□□□□ -0.68
USP3-207ENST00000558218 EHD2Q9NZN4 543 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 GTF3C4Q9UKN8 822 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 TSC2P49815 1807 aa10.83□□□□□ -0.68
USP3-207ENST00000558218 HEPACAM2A8MVW5 462 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 MAPK13O15264 365 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 RHOBTB3O94955 611 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 CST3P01034 146 aaPredicted RBP10.82□□□□□ -0.68
USP3-207ENST00000558218 F11P03951 625 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 RPN1P04843 607 aaKnown RBP10.82□□□□□ -0.68
USP3-207ENST00000558218 DLATP10515 647 aaKnown RBP10.82□□□□□ -0.68
USP3-207ENST00000558218 CD46P15529 392 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 HMGA1P17096 107 aaKnown RBP10.82□□□□□ -0.68
USP3-207ENST00000558218 GJA1P17302 382 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 PFKLP17858 780 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 CASP1P29466 404 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 GDI1P31150 447 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 GNL1P36915 607 aaPredicted RBP10.82□□□□□ -0.68
USP3-207ENST00000558218 VIPR2P41587 438 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 CYP2J2P51589 502 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 TRPC3Q13507 836 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 KCNB1Q14721 858 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 NFIL3Q16649 462 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 ZNF528Q3MIS6 628 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 GPR158Q5T848 1215 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 KRBA2Q6ZNG9 492 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms