RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 RTP2Q5QGT7 225 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 FAM171BQ6P995 826 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 C4orf50Q6ZRC1 276 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 PHF13Q86YI8 300 aaPredicted RBP17.86■□□□□ 0.45
SNX1-203ENST00000558040 CPA5Q8WXQ8 436 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 PIK3R5Q8WYR1 880 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 VCPIP1Q96JH7 1222 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 PLVAPQ9BX97 442 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 MIS12Q9H081 205 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 ZCWPW1Q9H0M4 648 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 CHST7Q9NS84 486 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 GTF3C4Q9UKN8 822 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 PCDHA11Q9Y5I1 949 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 LCHNA4D1U4 455 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 H0YGN5 161 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 CALB1P05937 261 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 URODP06132 367 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 LINC00271P0C7V0 271 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 FAM200BP0CF97 657 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 CTNNB1P35222 781 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 BMPR1AP36894 532 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 RABGGTBP53611 331 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 GALCP54803 685 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 SNX16P57768 344 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 C1QBPQ07021 282 aaKnown RBP17.85■□□□□ 0.45
SNX1-203ENST00000558040 SMARCB1Q12824 385 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 NFE2Q16621 373 aaPredicted RBP17.85■□□□□ 0.45
SNX1-203ENST00000558040 LIN9Q5TKA1 542 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 TAS1R1Q7RTX1 841 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 FAM35AQ86V20 835 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 SPATA2LQ8IUW3 424 aaPredicted RBP17.85■□□□□ 0.45
SNX1-203ENST00000558040 REXO1L1PQ8IX06 675 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 GPR65Q8IYL9 337 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 FUKQ8N0W3 1084 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 IPO4Q8TEX9 1081 aaKnown RBP17.85■□□□□ 0.45
SNX1-203ENST00000558040 RIN2Q8WYP3 895 aaPredicted RBP17.85■□□□□ 0.45
SNX1-203ENST00000558040 SECISBP2LQ93073 1101 aaKnown RBP17.85■□□□□ 0.45
SNX1-203ENST00000558040 MYLPFQ96A32 169 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 SMARCD1Q96GM5 515 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 PCED1BQ96HM7 432 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 B3GALT6Q96L58 329 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 PKMYT1Q99640 499 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 LPIN3Q9BQK8 851 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 VN1R3Q9BXE9 311 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 PACSIN1Q9BY11 444 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 B3GNT5Q9BYG0 378 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 SSX2IPQ9Y2D8 614 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 BACE2Q9Y5Z0 518 aa17.85■□□□□ 0.45
SNX1-203ENST00000558040 VWA8A3KMH1 1905 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 LINC01553A4QN01 128 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 USP27XA6NNY8 438 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 ABCB4P21439 1286 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 MMP8P22894 467 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 GPD2P43304 727 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 GPC5P78333 572 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 DSG1Q02413 1049 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 CREMQ03060 361 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 PSMD5Q16401 504 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 PKDCCQ504Y2 493 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 MON1BQ7L1V2 547 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 TTC30AQ86WT1 665 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 ERICH1Q86X53 443 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 MCOLN2Q8IZK6 566 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 C17orf53Q8N3J3 647 aaPredicted RBP17.84■□□□□ 0.45
SNX1-203ENST00000558040 UBA3Q8TBC4 463 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 STK32AQ8WU08 396 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 ZNF653Q96CK0 615 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 SAMD11Q96NU1 681 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 DUSP16Q9BY84 665 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 SYNCQ9H7C4 482 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 LZTFL1Q9NQ48 299 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 KRT82Q9NSB4 513 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 ADAM22Q9P0K1 906 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 MTRRQ9UBK8 725 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 STRIP2Q9ULQ0 834 aa17.84■□□□□ 0.45
SNX1-203ENST00000558040 A0A0A6YYK5 440 aaPredicted RBP17.83■□□□□ 0.44
SNX1-203ENST00000558040 BTNL10A8MVZ5 291 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 TBC1D4O60343 1298 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 CPB1P15086 417 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 NPR3P17342 541 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 BMP8BP34820 402 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 PDE4CQ08493 712 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 PDCLQ13371 301 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 SLC39A12Q504Y0 691 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 MMS22LQ6ZRQ5 1243 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 VPS52Q8N1B4 723 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 WDTC1Q8N5D0 677 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 KLHL23Q8NBE8 558 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 FUBP3Q96I24 572 aaKnown RBP eCLIP17.83■□□□□ 0.44
SNX1-203ENST00000558040 TMEM209Q96SK2 561 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 C11orf70Q9BRQ4 267 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 LACRTQ9GZZ8 138 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 THAP2Q9H0W7 228 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 CYLDQ9NQC7 956 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.83■□□□□ 0.44
SNX1-203ENST00000558040 MRPL17Q9NRX2 175 aaKnown RBP17.83■□□□□ 0.44
SNX1-203ENST00000558040 LZTS1Q9Y250 596 aa17.83■□□□□ 0.44
SNX1-203ENST00000558040 NCANO14594 1321 aa17.82■□□□□ 0.44
SNX1-203ENST00000558040 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.82■□□□□ 0.44
SNX1-203ENST00000558040 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms