RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 CSH2P0DML3 217 aa17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 SOX9P48436 509 aa17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 MYL6P60660 151 aa17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 PSMD2Q13200 908 aa17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 FSIP1Q8NA03 581 aa17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 RIN3Q8TB24 985 aa17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 GOLGA5Q8TBA6 731 aa17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 NKD2Q969F2 451 aaPredicted RBP17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 FUBP3Q96I24 572 aaKnown RBP eCLIP17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 MMS19Q96T76 1030 aa17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 XYLT2Q9H1B5 865 aa17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 SPATA6Q9NWH7 488 aaPredicted RBP17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 OBP2AQ9NY56 170 aa17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 CDH9Q9ULB4 789 aa17.35■□□□□ 0.37
AC027088.1-201ENST00000557966 A0A1W2PQ27 194 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 A0A1W2PQ64 194 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 A0A1W2PQD8 194 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 MAN2B1O00754 1011 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 DPYSL4O14531 572 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 STAU1O95793 577 aaKnown RBP17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 RPN1P04843 607 aaKnown RBP17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 MYL1P05976 194 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 PDGFRBP09619 1106 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 MAGEA9P43362 315 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 RPL10AP62906 217 aaKnown RBP17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 DPYDQ12882 1025 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 TDRD10Q5VZ19 366 aaKnown RBP17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 TXNDC8Q6A555 127 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 SLC9A9Q8IVB4 645 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 SCN4BQ8IWT1 228 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 TTC8Q8TAM2 541 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 BPIFB1Q8TDL5 484 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 PARD3BQ8TEW8 1205 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 FAM3CQ92520 227 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 ELMO3Q96BJ8 720 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 NELL2Q99435 816 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 CCL26Q9Y258 94 aa17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 MRPS17Q9Y2R5 130 aaKnown RBP17.34■□□□□ 0.37
AC027088.1-201ENST00000557966 VPS13AQ96RL7 3174 aa17.33■□□□□ 0.37
AC027088.1-201ENST00000557966 TACC1O75410 805 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 CCNE1P24864 410 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 RPS9P46781 194 aaKnown RBP17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 DLG4P78352 724 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 WDR72Q3MJ13 1102 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 ARHGAP29Q52LW3 1261 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 WDR44Q5JSH3 913 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 TXNDC11Q6PKC3 985 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 KRBA2Q6ZNG9 492 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 C4orf50Q6ZRC1 276 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 CMTM8Q8IZV2 173 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 MAB21L3Q8N8X9 362 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 CSGALNACT1Q8TDX6 532 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 TMEM174Q8WUU8 243 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 TRMT2BQ96GJ1 504 aaKnown RBP17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 PCED1BQ96HM7 432 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 MYRFLQ96LU7 910 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 SCAND2PQ9GZW5 306 aaPredicted RBP17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 DPEP3Q9H4B8 488 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 GTSE1Q9NYZ3 720 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 ATP6V1DQ9Y5K8 247 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 DENND4CQ5VZ89 1909 aa17.33■□□□□ 0.36
AC027088.1-201ENST00000557966 PDXKO00764 312 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 NCAM2O15394 837 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 LAMTOR5O43504 91 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 RHOBTB3O94955 611 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 VNN1O95497 513 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 C4BPAP04003 597 aaKnown RBP17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 NR3C1P04150 777 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 BDNFP23560 247 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 DDX6P26196 483 aaKnown RBP eCLIP17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 MAGEA11P43364 429 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 TNNC1P63316 161 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 CLDN10P78369 228 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 TNK2Q07912 1038 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 TRPC3Q13507 836 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 MDH1BQ5I0G3 518 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 CELF5Q8N6W0 485 aaKnown RBP17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 OR6B3Q8NGW1 331 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 USP13Q92995 863 aaPredicted RBP17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 CHRDQ9H2X0 955 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 SMYD3Q9H7B4 428 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 MAGEC2Q9UBF1 373 aaPredicted RBP17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 NXF1Q9UBU9 619 aaKnown RBP17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 FBXO4Q9UKT5 387 aa17.32■□□□□ 0.36
AC027088.1-201ENST00000557966 PTPRDP23468 1912 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 SPECC1L-ADORA2AF8WAN1 911 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 CHRNB1P11230 501 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 ATICP31939 592 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 AVPR1AP37288 418 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 RAP1GAPP47736 663 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 CACNA2D1P54289 1103 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 MLLT6P55198 1093 aaPredicted RBP17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 CYP27A1Q02318 531 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 MTAPQ13126 283 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 BIRC3Q13489 604 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 TSSK4Q6SA08 328 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 MON1AQ86VX9 555 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 MYCBPAPQ8TBZ2 947 aa17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 MRPS31Q92665 395 aaKnown RBP17.31■□□□□ 0.36
AC027088.1-201ENST00000557966 MSANTD3Q96H12 275 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms