RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 RPGRIP1Q96KN7 1286 aa15.27■□□□□ 0.04
USP3-205ENST00000557884 CORO1BQ9BR76 489 aa15.27■□□□□ 0.04
USP3-205ENST00000557884 MED10Q9BTT4 135 aa15.27■□□□□ 0.04
USP3-205ENST00000557884 NT5C1AQ9BXI3 368 aa15.27■□□□□ 0.04
USP3-205ENST00000557884 B3GNT5Q9BYG0 378 aa15.27■□□□□ 0.04
USP3-205ENST00000557884 ZNF518BQ9C0D4 1074 aa15.27■□□□□ 0.04
USP3-205ENST00000557884 CBX8Q9HC52 389 aa15.27■□□□□ 0.04
USP3-205ENST00000557884 CEP72Q9P209 647 aa15.27■□□□□ 0.04
USP3-205ENST00000557884 DNMT3BQ9UBC3 853 aaKnown RBP15.27■□□□□ 0.04
USP3-205ENST00000557884 CLUHO75153 1309 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 SMTNL1A8MU46 457 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 PAPLNO95428 1278 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 TPM2P07951 284 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 POU2F2P09086 479 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 ZNF18P17022 549 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 ATF6P18850 670 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 TBXAS1P24557 533 aaPredicted RBP15.26■□□□□ 0.03
USP3-205ENST00000557884 COPB1P53618 953 aaKnown RBP15.26■□□□□ 0.03
USP3-205ENST00000557884 IQCB1Q15051 598 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 DDR2Q16832 855 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 PABPC1LQ4VXU2 614 aaKnown RBP15.26■□□□□ 0.03
USP3-205ENST00000557884 PHLDB3Q6NSJ2 640 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 GJB7Q6PEY0 223 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 CYP26C1Q6V0L0 522 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 GET4Q7L5D6 327 aaPredicted RBP15.26■□□□□ 0.03
USP3-205ENST00000557884 HS6ST3Q8IZP7 471 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 ANKRD20A12PQ8NF67 263 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 ADAMTS19Q8TE59 1207 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 FUBP3Q96I24 572 aaKnown RBP eCLIP15.26■□□□□ 0.03
USP3-205ENST00000557884 FAXDC2Q96IV6 333 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 ZNF512Q96ME7 567 aaPredicted RBP15.26■□□□□ 0.03
USP3-205ENST00000557884 PHF7Q9BWX1 381 aaPredicted RBP15.26■□□□□ 0.03
USP3-205ENST00000557884 WDR6Q9NNW5 1121 aaKnown RBP15.26■□□□□ 0.03
USP3-205ENST00000557884 ABCB6Q9NP58 842 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 FAM49BQ9NUQ9 324 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 HSFX1Q9UBD0 423 aa15.26■□□□□ 0.03
USP3-205ENST00000557884 GTPBP10A4D1E9 387 aaKnown RBP15.25■□□□□ 0.03
USP3-205ENST00000557884 RHOP08100 348 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 FSHRP23945 695 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 PON1P27169 355 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 GRIK1P39086 918 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 CACNA2D1P54289 1103 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 YWHAEP62258 255 aaKnown RBP15.25■□□□□ 0.03
USP3-205ENST00000557884 VEPH1Q14D04 833 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 CFAP221Q4G0U5 840 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 IQCEQ6IPM2 695 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 TRIM65Q6PJ69 517 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 LUZP1Q86V48 1076 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 CRYBG2Q8N1P7 616 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 UBR7Q8N806 425 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 SLC2A14Q8TDB8 520 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 KREMEN1Q96MU8 473 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 UBE2TQ9NPD8 197 aaPredicted RBP15.25■□□□□ 0.03
USP3-205ENST00000557884 LIMA1Q9UHB6 759 aaKnown RBP15.25■□□□□ 0.03
USP3-205ENST00000557884 PCDHB4Q9Y5E5 795 aa15.25■□□□□ 0.03
USP3-205ENST00000557884 MYL4P12829 197 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 PTPN2P17706 415 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 ACO1P21399 889 aaKnown RBP15.24■□□□□ 0.03
USP3-205ENST00000557884 ADORA2BP29275 332 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 MAGEA11P43364 429 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 RAD23BP54727 409 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 ZP2Q05996 745 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 MTMR3Q13615 1198 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 TAF12Q16514 161 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 DNAJB7Q7Z6W7 309 aaPredicted RBP15.24■□□□□ 0.03
USP3-205ENST00000557884 FAM35AQ86V20 835 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 ADHFE1Q8IWW8 467 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 FUKQ8N0W3 1084 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 TTC39CQ8N584 583 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 SLC4A11Q8NBS3 891 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 ITFG1Q8TB96 612 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 ING5Q8WYH8 240 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 TCEAL4Q96EI5 215 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 TMEM176AQ96HP8 235 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 HEXIM2Q96MH2 286 aaKnown RBP15.24■□□□□ 0.03
USP3-205ENST00000557884 UHRF1Q96T88 793 aaPredicted RBP15.24■□□□□ 0.03
USP3-205ENST00000557884 LSM14BQ9BX40 385 aaKnown RBP15.24■□□□□ 0.03
USP3-205ENST00000557884 ASAH2Q9NR71 780 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 KRT82Q9NSB4 513 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 TMEM30AQ9NV96 361 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 APEX2Q9UBZ4 518 aa15.24■□□□□ 0.03
USP3-205ENST00000557884 MRPS23Q9Y3D9 190 aaKnown RBP15.24■□□□□ 0.03
USP3-205ENST00000557884 ATP8B3O60423 1300 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 C2CD4DB7Z1M9 353 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 F8VP50 259 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 NRG2O14511 850 aaPredicted RBP15.23■□□□□ 0.03
USP3-205ENST00000557884 AP1G2O75843 785 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 CALCAP01258 141 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 TRIM21P19474 475 aaKnown RBP15.23■□□□□ 0.03
USP3-205ENST00000557884 GBP2P32456 591 aaPredicted RBP15.23■□□□□ 0.03
USP3-205ENST00000557884 SSTR3P32745 418 aaPredicted RBP15.23■□□□□ 0.03
USP3-205ENST00000557884 CCR2P41597 374 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 RPL10AP62906 217 aaKnown RBP15.23■□□□□ 0.03
USP3-205ENST00000557884 GCNT1Q02742 428 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 KCNMA1Q12791 1236 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 ARHGAP44Q17R89 818 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 SLC5A9Q2M3M2 681 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 TMEM270Q6UE05 265 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 VSTM1Q6UX27 236 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 PAQR9Q6ZVX9 377 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms