RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 PDXDC1Q6P996 788 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 SYCE2Q6PIF2 218 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 TRIM65Q6PJ69 517 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 SCARA5Q6ZMJ2 495 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 GAS2L3Q86XJ1 694 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 GLYCTKQ8IVS8 523 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 MICALL1Q8N3F8 863 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 TTC9BQ8N6N2 239 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 EHBP1Q8NDI1 1231 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 MAFAQ8NHW3 353 aaPredicted RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 ZNF461Q8TAF7 563 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 FAM200AQ8TCP9 573 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 HPS1Q92902 700 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 PABPC5Q96DU9 382 aaKnown RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 FAXDC2Q96IV6 333 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 MSLNLQ96KJ4 702 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 KREMEN1Q96MU8 473 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 LPIN3Q9BQK8 851 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 ACBD6Q9BR61 282 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 CRACR2AQ9BSW2 395 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 INTS2Q9H0H0 1204 aaKnown RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 DPEP3Q9H4B8 488 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 CRTAC1Q9NQ79 661 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 TMEM30AQ9NV96 361 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 DDX43Q9NXZ2 648 aaKnown RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 DSEQ9UL01 958 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 TCF20Q9UGU0 1960 aaKnown RBP9.64□□□□□ -0.87
CHD8-214ENST00000557727 BDP1A6H8Y1 2624 aa9.64□□□□□ -0.87
CHD8-214ENST00000557727 MYBPHLA2RUH7 354 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 MTMR11A4FU01 709 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 OR6C75A6NL08 312 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 LGALS16A8MUM7 142 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 H7C4K7 107 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 WIPF1O43516 503 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 HUS1O60921 280 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 CILPO75339 1184 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 NOL4O94818 638 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 ADH1AP07327 375 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 SPATA31D3P0C874 917 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 TNNC1P63316 161 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 CREMQ03060 361 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 GPR17Q13304 367 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 CUL2Q13617 745 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 INTS6LQ5JSJ4 861 aaKnown RBP9.63□□□□□ -0.87
CHD8-214ENST00000557727 GJB7Q6PEY0 223 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 SPATA31D4Q6ZUB0 917 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 PALB2Q86YC2 1186 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 NAP1L5Q96NT1 182 aaPredicted RBP9.63□□□□□ -0.87
CHD8-214ENST00000557727 EMILIN2Q9BXX0 1053 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 OXCT2Q9BYC2 517 aaPredicted RBP9.63□□□□□ -0.87
CHD8-214ENST00000557727 ELOVL4Q9GZR5 314 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 S1PR5Q9H228 398 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 TSPY26PQ9H489 355 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 CYP3A43Q9HB55 503 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 GCNT4Q9P109 453 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 MAGEC2Q9UBF1 373 aaPredicted RBP9.63□□□□□ -0.87
CHD8-214ENST00000557727 BARX2Q9UMQ3 279 aaPredicted RBP9.63□□□□□ -0.87
CHD8-214ENST00000557727 CNTN6Q9UQ52 1028 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 SIK3Q9Y2K2 1263 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 VCANP13611 3396 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 MYO16Q9Y6X6 1858 aa9.63□□□□□ -0.87
CHD8-214ENST00000557727 A0A1B0GTH6 734 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 ARHGEF37A1IGU5 675 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 SMTNL1A8MU46 457 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 EPHB6O15197 1021 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 GLUD1P00367 558 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 PRKCSHP14314 528 aaPredicted RBP9.62□□□□□ -0.87
CHD8-214ENST00000557727 SNRPBP14678 240 aaKnown RBP9.62□□□□□ -0.87
CHD8-214ENST00000557727 ATF2P15336 505 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 KLRC2P26717 231 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 GNL1P36915 607 aaPredicted RBP9.62□□□□□ -0.87
CHD8-214ENST00000557727 LHX1P48742 406 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 KLK7P49862 253 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 CDR1P51861 262 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 ZNF132P52740 706 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 NDST1P52848 882 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 RAD23BP54727 409 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 PSMC1P62191 440 aaKnown RBP9.62□□□□□ -0.87
CHD8-214ENST00000557727 GCNT1Q02742 428 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 GUCA2AQ02747 115 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 LRMPQ12912 555 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 ORC1Q13415 861 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 TPGS2Q68CL5 300 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 ANKRD54Q6NXT1 300 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 LLGL2Q6P1M3 1020 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 PAQR9Q6ZVX9 377 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 RETREG3Q86VR2 466 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 PPFIBP1Q86W92 1011 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 CREBRFQ8IUR6 639 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 TCEAL8Q8IYN2 117 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 CRYBG2Q8N1P7 616 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 ATAD1Q8NBU5 361 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 ZNF707Q96C28 371 aaPredicted RBP9.62□□□□□ -0.87
CHD8-214ENST00000557727 ERGIC2Q96RQ1 377 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 MMS19Q96T76 1030 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 SYT15Q9BQS2 421 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 ZSWIM1Q9BR11 485 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 NAA15Q9BXJ9 866 aaKnown RBP9.62□□□□□ -0.87
CHD8-214ENST00000557727 GPR88Q9GZN0 384 aa9.62□□□□□ -0.87
CHD8-214ENST00000557727 VPS16Q9H269 839 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms