RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CHSY1Q86X52 802 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 SCYL3Q8IZE3 742 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 ARHGAP24Q8N264 748 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 NLGN1Q8N2Q7 840 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 FBXO36Q8NEA4 188 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 ZNF606Q8WXB4 792 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 CPT1BQ92523 772 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 PTPRN2Q92932 1015 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 ACSF2Q96CM8 615 aaPredicted RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 KLF6Q99612 283 aaPredicted RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 FRMD8P1Q9BZ68 369 aaPredicted RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 GLIS2Q9BZE0 524 aaPredicted RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 HOMER2Q9NSB8 354 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 ARHGAP28Q9P2N2 729 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 GABBR1Q9UBS5 961 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 AGO2Q9UKV8 859 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 ASB3Q9Y575 518 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 CLRN2A0PK11 232 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 TESPA1A2RU30 521 aaPredicted RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 E7ESA3 106 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 ACOT2P49753 483 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 PAPOLAP51003 745 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 NLRP11P59045 1033 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 GAD2Q05329 585 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 RBBP5Q15291 538 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 MSS51Q4VC12 460 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 ANKRD22Q5VYY1 191 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 TXNRD3NBQ6F5E7 133 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 NAT8LQ8N9F0 302 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 TTC13Q8NBP0 860 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 ATP6V0A1Q93050 837 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 C12orf65Q9H3J6 166 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 ALG13Q9NP73 1137 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 PAPOLBQ9NRJ5 636 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 STX18Q9P2W9 335 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 AGTPBP1Q9UPW5 1226 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 PTPRJQ12913 1337 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 IQANK1A0A1B0GTG1 560 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 SMAPO00193 183 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 GNAT1P11488 350 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 WNT7BP56706 349 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 BBS9Q3SYG4 887 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 PDIK1LQ8N165 341 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 CEP120Q8N960 986 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 RSAD2Q8WXG1 361 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 CYTH2Q99418 400 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 KCNK13Q9HB14 408 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 RBAKQ9NYW8 714 aaPredicted RBP12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNRF3Q9ULT6 936 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 NUB1Q9Y5A7 615 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 IKBKGQ9Y6K9 419 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 A8MXQ7 604 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 SNUPNO95149 360 aaKnown RBP12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 LSM8O95777 96 aaKnown RBP12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 GSTA2P09210 222 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 DHRS4L1P0CG22 281 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 RFC5P40937 340 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 RPS6P62753 249 aaKnown RBP12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 OTUD4Q01804 1114 aaKnown RBP12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 OGDHQ02218 1023 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 PRKD1Q15139 912 aaPredicted RBP12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 RINLQ6ZS11 566 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 MFN1Q8IWA4 741 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 ACTL9Q8TC94 416 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 UCMAQ8WVF2 138 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 NRG4Q8WWG1 115 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 APOPT1Q96IL0 206 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 RMDN3Q96TC7 470 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 PDCD2LQ9BRP1 358 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 POLR3FQ9H1D9 316 aaPredicted RBP12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 XPNPEP1Q9NQW7 623 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 PDLIM7Q9NR12 457 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 FBXO6Q9NRD1 293 aaPredicted RBP12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 GINM1Q9NU53 330 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 TAS2R1Q9NYW7 299 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNF212Q9UDV6 495 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 KCNG1Q9UIX4 513 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 EFR3BQ9Y2G0 817 aa12.39□□□□□ -0.43
VIPAS39-211ENST00000557658 TCRBV5S1A1TA0A578 114 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 MAP3K7O43318 606 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNF862O60290 1169 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 TBX10O75333 385 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 PIAS1O75925 651 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 DLDP09622 509 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 RPL22P35268 128 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 DYNLT1P63172 113 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 AP1B1Q10567 949 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 POLNQ7Z5Q5 900 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 ZC3H18Q86VM9 953 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 PDCD7Q8N8D1 485 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 NIPA2Q8N8Q9 360 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 TMEM35BQ8NCS4 154 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 TTC17Q96AE7 1141 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 CGRRF1Q99675 332 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 WDR83Q9BRX9 315 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 RAVER2Q9HCJ3 691 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 PXMP2Q9NR77 195 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNF70Q9UC06 446 aaPredicted RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 STYXL1Q9Y6J8 313 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms