RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 SMAD1Q15797 465 aaKnown RBP10.88□□□□□ -0.67
ABCD4-227ENST00000557554 HSF5Q4G112 596 aaPredicted RBP10.88□□□□□ -0.67
ABCD4-227ENST00000557554 OVOS1Q6IE37 1185 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 APBB1IPQ7Z5R6 666 aaPredicted RBP10.88□□□□□ -0.67
ABCD4-227ENST00000557554 LRRTM3Q86VH5 581 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 CATSPER3Q86XQ3 398 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 GALNT15Q8N3T1 639 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 KNL1Q8NG31 2342 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 OR10T2Q8NGX3 314 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 GIPC2Q8TF65 315 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 LRRC15Q8TF66 581 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 ZNF419Q96HQ0 510 aaPredicted RBP10.88□□□□□ -0.67
ABCD4-227ENST00000557554 NACC1Q96RE7 527 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 SLC22A12Q96S37 553 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
ABCD4-227ENST00000557554 POLD4Q9HCU8 107 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
ABCD4-227ENST00000557554 CABIN1Q9Y6J0 2220 aa10.88□□□□□ -0.67
ABCD4-227ENST00000557554 TEX51A0A1B0GUA7 166 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 FAM149AA5PLN7 773 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 E9PAM4 449 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 K7ERI5 159 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 TLX3O43711 291 aaPredicted RBP10.87□□□□□ -0.67
ABCD4-227ENST00000557554 BAG4O95429 457 aaKnown RBP10.87□□□□□ -0.67
ABCD4-227ENST00000557554 KLF8O95600 359 aaPredicted RBP10.87□□□□□ -0.67
ABCD4-227ENST00000557554 MCF2P10911 925 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 FAM160A1Q05DH4 1040 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 SSRP1Q08945 709 aaKnown RBP10.87□□□□□ -0.67
ABCD4-227ENST00000557554 NR1H3Q13133 447 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 DMP1Q13316 513 aaPredicted RBP10.87□□□□□ -0.67
ABCD4-227ENST00000557554 VEPH1Q14D04 833 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 EARS2Q5JPH6 523 aaKnown RBP10.87□□□□□ -0.67
ABCD4-227ENST00000557554 PADI6Q6TGC4 694 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 SLC36A4Q6YBV0 504 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 TAS1R3Q7RTX0 852 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 USP37Q86T82 979 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 TRIM22Q8IYM9 498 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 HMGB4Q8WW32 186 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 KCNB2Q92953 911 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 FCRL3Q96P31 734 aaPredicted RBP10.87□□□□□ -0.67
ABCD4-227ENST00000557554 GCNAQ96QF7 691 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 SEPT5Q99719 369 aaPredicted RBP10.87□□□□□ -0.67
ABCD4-227ENST00000557554 PI4K2AQ9BTU6 479 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 TTC12Q9H892 705 aaPredicted RBP10.87□□□□□ -0.67
ABCD4-227ENST00000557554 KCNJ14Q9UNX9 436 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 MYOFQ9NZM1 2061 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 ANAPC1Q9H1A4 1944 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 ANK1P16157 1881 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 TEX15Q9BXT5 2789 aa10.87□□□□□ -0.67
ABCD4-227ENST00000557554 DTNBO60941 627 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 TADA3O75528 432 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 ZNF883P0CG24 379 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 HAPLN1P10915 354 aaPredicted RBP10.86□□□□□ -0.67
ABCD4-227ENST00000557554 TCF3P15923 654 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 GABRG2P18507 467 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 TIE1P35590 1138 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 SLC6A11P48066 632 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 ZXDBP98169 803 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 USP4Q13107 963 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 PPP2R5AQ15172 486 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 PLEKHG6Q3KR16 790 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 MGAT5BQ3V5L5 792 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 ZNF568Q3ZCX4 644 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 ARMCX5Q6P1M9 558 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 GPR155Q7Z3F1 870 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 ADGRG2Q8IZP9 1017 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 TRIML1Q8N9V2 468 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 OXER1Q8TDS5 423 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 CCDC43Q96MW1 224 aaKnown RBP10.86□□□□□ -0.67
ABCD4-227ENST00000557554 PNMA5Q96PV4 448 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 KIF2CQ99661 725 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 ZCWPW1Q9H0M4 648 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 FAM124BQ9H5Z6 455 aaPredicted RBP10.86□□□□□ -0.67
ABCD4-227ENST00000557554 IL21RQ9HBE5 538 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 CD248Q9HCU0 757 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 GCNT4Q9P109 453 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 BCCIPQ9P287 314 aaKnown RBP eCLIP10.86□□□□□ -0.67
ABCD4-227ENST00000557554 STK24Q9Y6E0 443 aa10.86□□□□□ -0.67
ABCD4-227ENST00000557554 IGHV1OR15-9A0A0B4J2B8 117 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 TCRBV21S2A2A0A5A6 115 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 PYCARD-AS1I3L0S3 204 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 CDC45O75419 566 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 DEXIO95424 95 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 CYP3A5P20815 502 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 IFNAR2P48551 515 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 LILRA4P59901 499 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 GRIK2Q13002 908 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 TOB2Q14106 344 aaPredicted RBP10.85□□□□□ -0.67
ABCD4-227ENST00000557554 PTPRNQ16849 979 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 SLC39A12Q504Y0 691 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 EOGTQ5NDL2 527 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 PIK3AP1Q6ZUJ8 805 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 SETD7Q8WTS6 366 aaKnown RBP10.85□□□□□ -0.67
ABCD4-227ENST00000557554 ZBTB45Q96K62 511 aaPredicted RBP10.85□□□□□ -0.67
ABCD4-227ENST00000557554 MTMR9Q96QG7 549 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 NAP1L4Q99733 375 aaKnown RBP10.85□□□□□ -0.67
ABCD4-227ENST00000557554 TARS2Q9BW92 718 aaKnown RBP10.85□□□□□ -0.67
ABCD4-227ENST00000557554 ZDHHC5Q9C0B5 715 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 TMEM134Q9H6X4 195 aa10.85□□□□□ -0.67
ABCD4-227ENST00000557554 GJB4Q9NTQ9 266 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms