RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 DGAT1O75907 488 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 EDN1P05305 212 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 CD48P09326 243 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 BGNP21810 368 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 RPL22P35268 128 aaKnown RBP11.95□□□□□ -0.5
SRP54-213ENST00000556994 CPA2P48052 419 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 ARFIP2P53365 341 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 ARL4CP56559 192 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 SATB1Q01826 763 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 PRKCEQ02156 737 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 NCOA4Q13772 614 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 BAATQ14032 418 aaPredicted RBP11.95□□□□□ -0.5
SRP54-213ENST00000556994 TSNAXIP1Q2TAA8 658 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 GNPTABQ3T906 1256 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 IGDCC3Q8IVU1 814 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 UNC45BQ8IWX7 931 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 PPIL6Q8IXY8 311 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 ATP11CQ8NB49 1132 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 SLC35B2Q8TB61 432 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 FBXO41Q8TF61 875 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 WDR60Q8WVS4 1066 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 NKD2Q969F2 451 aaPredicted RBP11.95□□□□□ -0.5
SRP54-213ENST00000556994 PTCD3Q96EY7 689 aaKnown RBP11.95□□□□□ -0.5
SRP54-213ENST00000556994 ANKRD27Q96NW4 1050 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 FAM111AQ96PZ2 611 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 MSTO1Q9BUK6 570 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 TMEM120AQ9BXJ8 343 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 TRIM55Q9BYV6 548 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 SLC38A10Q9HBR0 1119 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 ARMCX1Q9P291 453 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 TJP2Q9UDY2 1190 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 FBXO40Q9UH90 709 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 CTDP1Q9Y5B0 961 aaPredicted RBP11.95□□□□□ -0.5
SRP54-213ENST00000556994 SNCAIPQ9Y6H5 919 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 NVLO15381 856 aaKnown RBP11.95□□□□□ -0.5
SRP54-213ENST00000556994 LPXNO60711 386 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 TMEM63AO94886 807 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 ASNSP08243 561 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 IL1R2P27930 398 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 PHBP35232 272 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 MXRA7P84157 204 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 MCL1Q07820 350 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 MEX3CQ5U5Q3 659 aaKnown RBP11.95□□□□□ -0.5
SRP54-213ENST00000556994 SNX30Q5VWJ9 437 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 GPAT2Q6NUI2 795 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 WDTC1Q8N5D0 677 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 NAT8LQ8N9F0 302 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 MCPH1Q8NEM0 835 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 RSAD2Q8WXG1 361 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 NSL1Q96IY1 281 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 SERAC1Q96JX3 654 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 ACSS3Q9H6R3 686 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 SPATS2LQ9NUQ6 558 aaKnown RBP11.95□□□□□ -0.5
SRP54-213ENST00000556994 DLGAP2Q9P1A6 1054 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 XPO7Q9UIA9 1087 aaKnown RBP11.95□□□□□ -0.5
SRP54-213ENST00000556994 COL2A1P02458 1487 aaPredicted RBP11.95□□□□□ -0.5
SRP54-213ENST00000556994 TCRBV5S1A1TA0A578 114 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 C3orf70A6NLC5 250 aaPredicted RBP11.94□□□□□ -0.5
SRP54-213ENST00000556994 CAPN9O14815 690 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 ITGBL1O95965 494 aaPredicted RBP11.94□□□□□ -0.5
SRP54-213ENST00000556994 MT-ND3P03897 115 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 NR3C2P08235 984 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 WEE2P0C1S8 567 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 ACADSP16219 412 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 RFC1P35251 1148 aaPredicted RBP11.94□□□□□ -0.5
SRP54-213ENST00000556994 RFC5P40937 340 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 BASP1P80723 227 aaKnown RBP11.94□□□□□ -0.5
SRP54-213ENST00000556994 KLC1Q07866 573 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 SCARA5Q6ZMJ2 495 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 VPS52Q8N1B4 723 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 FAM71DQ8N9W8 422 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 SCG3Q8WXD2 468 aaKnown RBP11.94□□□□□ -0.5
SRP54-213ENST00000556994 ATP6V0A1Q93050 837 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 MCUR1Q96AQ8 359 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 ZNF333Q96JL9 665 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 PIDD1Q9HB75 910 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 TAS2R1Q9NYW7 299 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 WDR81Q562E7 1941 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 FAM237BA0A1B0GVD1 139 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 K7ERI5 159 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 SMIM24O75264 130 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 TBX10O75333 385 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 FAM155BO75949 473 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 RGS20O76081 388 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 CALB1P05937 261 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 PYGBP11216 843 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 VHLP40337 213 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 TNFSF9P41273 254 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 FAAP100Q0VG06 881 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 TAF5Q15542 800 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 RSBN1LQ6PCB5 846 aaPredicted RBP11.94□□□□□ -0.5
SRP54-213ENST00000556994 KIAA0319LQ8IZA0 1049 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 ARFGAP1Q8N6T3 406 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 JOSD2Q8TAC2 188 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 TFAP2BQ92481 460 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 DHRS4Q9BTZ2 278 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 VPS11Q9H270 941 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 STOML1Q9UBI4 398 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms