RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 MON1BQ7L1V2 547 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 RHOT2Q8IXI1 618 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 C12orf29Q8N999 325 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 CALR3Q96L12 384 aaKnown RBP25.15■■□□□ 1.62
SIX4-203ENST00000556952 NOX5Q96PH1 765 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 IRX2Q9BZI1 471 aaPredicted RBP25.15■■□□□ 1.62
SIX4-203ENST00000556952 CERS4Q9HA82 394 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 HCSTQ9UBK5 93 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 TSPAN16Q9UKR8 245 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 M0QYV0 167 aa25.14■■□□□ 1.62
SIX4-203ENST00000556952 C1QBPQ07021 282 aaKnown RBP25.14■■□□□ 1.62
SIX4-203ENST00000556952 BTG3Q14201 252 aaPredicted RBP25.14■■□□□ 1.62
SIX4-203ENST00000556952 TCEAL1Q15170 157 aa25.14■■□□□ 1.62
SIX4-203ENST00000556952 PPP1R26Q5T8A7 1209 aaPredicted RBP25.14■■□□□ 1.62
SIX4-203ENST00000556952 DENND1BQ6P3S1 775 aa25.14■■□□□ 1.62
SIX4-203ENST00000556952 MCOLN2Q8IZK6 566 aa25.14■■□□□ 1.62
SIX4-203ENST00000556952 C1orf131Q8NDD1 294 aaKnown RBP25.14■■□□□ 1.62
SIX4-203ENST00000556952 TRIM58Q8NG06 486 aa25.14■■□□□ 1.62
SIX4-203ENST00000556952 ZNF653Q96CK0 615 aa25.14■■□□□ 1.62
SIX4-203ENST00000556952 ALS2CR12Q96Q35 445 aa25.14■■□□□ 1.62
SIX4-203ENST00000556952 SALL4Q9UJQ4 1053 aa25.14■■□□□ 1.62
SIX4-203ENST00000556952 CDH9Q9ULB4 789 aa25.14■■□□□ 1.62
SIX4-203ENST00000556952 TIMM13Q9Y5L4 95 aaPredicted RBP25.14■■□□□ 1.62
SIX4-203ENST00000556952 CARNS1A5YM72 827 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 SYN3O14994 580 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 HCRTO43612 131 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 GALTP07902 379 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 LINC00271P0C7V0 271 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 ELAVL2Q12926 359 aaKnown RBP25.14■■□□□ 1.61
SIX4-203ENST00000556952 GOLGA7BQ2TAP0 167 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 ZNF569Q5MCW4 686 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 CMTR2Q8IYT2 770 aaKnown RBP25.14■■□□□ 1.61
SIX4-203ENST00000556952 DEFB123Q8N688 67 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 MSANTD4Q8NCY6 345 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 AVENQ9NQS1 362 aaPredicted RBP25.14■■□□□ 1.61
SIX4-203ENST00000556952 MARCH5Q9NX47 278 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 HESX1Q9UBX0 185 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 PAXBP1Q9Y5B6 917 aa25.14■■□□□ 1.61
SIX4-203ENST00000556952 MRPL42Q9Y6G3 142 aaKnown RBP25.14■■□□□ 1.61
SIX4-203ENST00000556952 SF3B1O75533 1304 aaKnown RBP eCLIP25.13■■□□□ 1.61
SIX4-203ENST00000556952 PTPN1P18031 435 aaKnown RBP25.13■■□□□ 1.61
SIX4-203ENST00000556952 MMP8P22894 467 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 OVOS1Q6IE37 1185 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 SYT10Q6XYQ8 523 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 THEM5Q8N1Q8 247 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 FIBCD1Q8N539 461 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 SYT15Q9BQS2 421 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 ACBD6Q9BR61 282 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 C17orf80Q9BSJ5 609 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 CWH43Q9H720 699 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 FAM49BQ9NUQ9 324 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 ADAM22Q9P0K1 906 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 MTUS1Q9ULD2 1270 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 VWA8A3KMH1 1905 aa25.13■■□□□ 1.61
SIX4-203ENST00000556952 MOCS3O95396 460 aa25.12■■□□□ 1.61
SIX4-203ENST00000556952 CYP1A2P05177 515 aa25.12■■□□□ 1.61
SIX4-203ENST00000556952 CALB1P05937 261 aa25.12■■□□□ 1.61
SIX4-203ENST00000556952 SETSIPP0DME0 302 aa25.12■■□□□ 1.61
SIX4-203ENST00000556952 NAP1L1P55209 391 aaKnown RBP25.12■■□□□ 1.61
SIX4-203ENST00000556952 BCAR1P56945 870 aa25.12■■□□□ 1.61
SIX4-203ENST00000556952 YWHAHQ04917 246 aaPredicted RBP25.12■■□□□ 1.61
SIX4-203ENST00000556952 GRIN2CQ14957 1233 aa25.12■■□□□ 1.61
SIX4-203ENST00000556952 LIN9Q5TKA1 542 aa25.12■■□□□ 1.61
SIX4-203ENST00000556952 WDTC1Q8N5D0 677 aa25.12■■□□□ 1.61
SIX4-203ENST00000556952 ARHGEF26Q96DR7 871 aa25.12■■□□□ 1.61
SIX4-203ENST00000556952 MYH10P35580 1976 aa25.12■■□□□ 1.61
SIX4-203ENST00000556952 EPOPA6NHQ4 379 aa25.11■■□□□ 1.61
SIX4-203ENST00000556952 ACAT1P24752 427 aaKnown RBP25.11■■□□□ 1.61
SIX4-203ENST00000556952 GPD2P43304 727 aa25.11■■□□□ 1.61
SIX4-203ENST00000556952 ALDH7A1P49419 539 aaKnown RBP25.11■■□□□ 1.61
SIX4-203ENST00000556952 HADHBP55084 474 aaKnown RBP25.11■■□□□ 1.61
SIX4-203ENST00000556952 PSMC1P62191 440 aaKnown RBP25.11■■□□□ 1.61
SIX4-203ENST00000556952 PKDCCQ504Y2 493 aa25.11■■□□□ 1.61
SIX4-203ENST00000556952 SLC35F6Q8N357 371 aa25.11■■□□□ 1.61
SIX4-203ENST00000556952 KIF18AQ8NI77 898 aa25.11■■□□□ 1.61
SIX4-203ENST00000556952 SLC35G2Q8TBE7 412 aa25.11■■□□□ 1.61
SIX4-203ENST00000556952 C11orf70Q9BRQ4 267 aa25.11■■□□□ 1.61
SIX4-203ENST00000556952 UVRAGQ9P2Y5 699 aa25.11■■□□□ 1.61
SIX4-203ENST00000556952 CNOT8Q9UFF9 292 aaKnown RBP25.11■■□□□ 1.61
SIX4-203ENST00000556952 DNAI1Q9UI46 699 aa25.11■■□□□ 1.61
SIX4-203ENST00000556952 PCDHGC5Q9Y5F6 944 aa25.11■■□□□ 1.61
SIX4-203ENST00000556952 CAPN6Q9Y6Q1 641 aa25.11■■□□□ 1.61
SIX4-203ENST00000556952 BUB1O43683 1085 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 NOP2P46087 812 aaKnown RBP25.1■■□□□ 1.61
SIX4-203ENST00000556952 BCAT1P54687 386 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 ERVK-21P61565 698 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 PTP4A2Q12974 167 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 MMS22LQ6ZRQ5 1243 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 ERICH1Q86X53 443 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 ARNTL2Q8WYA1 636 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 TGS1Q96RS0 853 aaKnown RBP25.1■■□□□ 1.61
SIX4-203ENST00000556952 WDR24Q96S15 920 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 HNRNPABQ99729 332 aaKnown RBP25.1■■□□□ 1.61
SIX4-203ENST00000556952 RTP3Q9BQQ7 232 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 STRIP2Q9ULQ0 834 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 MTA2O94776 668 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 OAZ2O95190 189 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 CCDC130P13994 396 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 KIAA0319Q5VV43 1072 aa25.1■■□□□ 1.61
SIX4-203ENST00000556952 FUT10Q6P4F1 479 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms