RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 ARHGAP17Q68EM7 881 aa13.28□□□□□ -0.28
ABCD4-225ENST00000556517 FAM171BQ6P995 826 aa13.28□□□□□ -0.28
ABCD4-225ENST00000556517 RSPO2Q6UXX9 243 aaPredicted RBP13.28□□□□□ -0.28
ABCD4-225ENST00000556517 PALB2Q86YC2 1186 aa13.28□□□□□ -0.28
ABCD4-225ENST00000556517 EPS8L1Q8TE68 723 aa13.28□□□□□ -0.28
ABCD4-225ENST00000556517 SMARCD1Q96GM5 515 aa13.28□□□□□ -0.28
ABCD4-225ENST00000556517 FAM161BQ96MY7 647 aa13.28□□□□□ -0.28
ABCD4-225ENST00000556517 CDCA3Q99618 268 aaPredicted RBP13.28□□□□□ -0.28
ABCD4-225ENST00000556517 NSUN3Q9H649 340 aaKnown RBP13.28□□□□□ -0.28
ABCD4-225ENST00000556517 KRT82Q9NSB4 513 aa13.28□□□□□ -0.28
ABCD4-225ENST00000556517 AFF4Q9UHB7 1163 aaKnown RBP13.28□□□□□ -0.28
ABCD4-225ENST00000556517 NME7Q9Y5B8 376 aa13.28□□□□□ -0.28
ABCD4-225ENST00000556517 PCDHGC5Q9Y5F6 944 aa13.28□□□□□ -0.28
ABCD4-225ENST00000556517 MTMR11A4FU01 709 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 M0QYV0 167 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 O00370 1275 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 ADAM12O43184 909 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 C1RP00736 705 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 SERPING1P05155 500 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 ATF2P15336 505 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 IGFBP4P22692 258 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 ANXA13P27216 316 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 TUFMP49411 452 aaKnown RBP13.27□□□□□ -0.29
ABCD4-225ENST00000556517 BCAT1P54687 386 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 ADCY1Q08828 1119 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 MGAT5BQ3V5L5 792 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 CFAP221Q4G0U5 840 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 PPP1R26Q5T8A7 1209 aaPredicted RBP13.27□□□□□ -0.29
ABCD4-225ENST00000556517 VSTM1Q6UX27 236 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 RNF19BQ6ZMZ0 732 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 CCDC149Q6ZUS6 474 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 RBM23Q86U06 439 aaKnown RBP13.27□□□□□ -0.29
ABCD4-225ENST00000556517 FAM35AQ86V20 835 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 LRRTM3Q86VH5 581 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 GPIHBP1Q8IV16 184 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 ZNF606Q8WXB4 792 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 PANX2Q96RD6 677 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 PKMYT1Q99640 499 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 SEPT5Q99719 369 aaPredicted RBP13.27□□□□□ -0.29
ABCD4-225ENST00000556517 HNRNPABQ99729 332 aaKnown RBP13.27□□□□□ -0.29
ABCD4-225ENST00000556517 DEF6Q9H4E7 631 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 CYP4F11Q9HBI6 524 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 SEPT11Q9NVA2 429 aaKnown RBP13.27□□□□□ -0.29
ABCD4-225ENST00000556517 HSFX1Q9UBD0 423 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 TSPAN16Q9UKR8 245 aa13.27□□□□□ -0.29
ABCD4-225ENST00000556517 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.27□□□□□ -0.29
ABCD4-225ENST00000556517 CHD9Q3L8U1 2897 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 LAMA3Q16787 3333 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 TRIM66O15016 1216 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 TGM5O43548 720 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 AP1G2O75843 785 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 ABLIM3O94929 683 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 SETSIPP0DME0 302 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 BDNFP23560 247 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 HNRNPH3P31942 346 aaKnown RBP13.26□□□□□ -0.29
ABCD4-225ENST00000556517 GRIK1P39086 918 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 PRKCIP41743 596 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 NRIP1P48552 1158 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 CLCN4P51793 760 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 RPL10AP62906 217 aaKnown RBP13.26□□□□□ -0.29
ABCD4-225ENST00000556517 CDR2Q01850 454 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 CCDC173Q0VFZ6 552 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 PLD1Q13393 1074 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 CNGA2Q16280 664 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 MEA1Q16626 185 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 TAF3Q5VWG9 929 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 LCLAT1Q6UWP7 414 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 TRIM72Q6ZMU5 477 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 IRF2BP2Q7Z5L9 587 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 NOP9Q86U38 636 aaKnown RBP13.26□□□□□ -0.29
ABCD4-225ENST00000556517 FUKQ8N0W3 1084 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 TC2NQ8N9U0 490 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 TFAP2BQ92481 460 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 NOX5Q96PH1 765 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 LPIN3Q9BQK8 851 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 B3GNT5Q9BYG0 378 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 ZNF518BQ9C0D4 1074 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 DMAP1Q9NPF5 467 aaPredicted RBP13.26□□□□□ -0.29
ABCD4-225ENST00000556517 ACP6Q9NPH0 428 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 TMLHEQ9NVH6 421 aa13.26□□□□□ -0.29
ABCD4-225ENST00000556517 NOCTQ9UK39 431 aaKnown RBP13.26□□□□□ -0.29
ABCD4-225ENST00000556517 CLDN5O00501 218 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 PER2O15055 1255 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 CLASP2O75122 1294 aaKnown RBP13.25□□□□□ -0.29
ABCD4-225ENST00000556517 MICAL2O94851 1124 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 LSM8O95777 96 aaKnown RBP13.25□□□□□ -0.29
ABCD4-225ENST00000556517 MMEP08473 750 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 NPR3P17342 541 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 MAGEA11P43364 429 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 ALDH1A3P47895 512 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 CDR1P51861 262 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 GOLGA8FQ08AF8 430 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 GOLGA8DPQ0D2H9 430 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 BST2Q10589 180 aaKnown RBP13.25□□□□□ -0.29
ABCD4-225ENST00000556517 DUSP4Q13115 394 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 ARID5BQ14865 1188 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 VEPH1Q14D04 833 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 DUSP6Q16828 381 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 CCDC142Q17RM4 750 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 RTL10Q7L3V2 364 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms