RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 CES2O00748 559 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 FCGR1AP12314 374 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 CNGA3Q16281 694 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 LVRNQ6Q4G3 990 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ELMO2Q96JJ3 720 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 GPR101Q96P66 508 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ARMC7Q9H6L4 198 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 TASP1Q9H6P5 420 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 EVA1BQ9NVM1 165 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 CD274Q9NZQ7 290 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 SLC24A2Q9UI40 661 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 CRLS1Q9UJA2 301 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 TRMT6Q9UJA5 497 aaKnown RBP11.15□□□□□ -0.62
ACTN1-216ENST00000556083 EIF2S1P05198 315 aaKnown RBP11.15□□□□□ -0.62
ACTN1-216ENST00000556083 WEE2P0C1S8 567 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ITGALP20701 1170 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 GNASQ5JWF2 1037 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ANGEL2Q5VTE6 544 aaKnown RBP11.15□□□□□ -0.62
ACTN1-216ENST00000556083 PCNX4Q63HM2 1172 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ZNF280DQ6N043 979 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 LRRC6Q86X45 466 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 SKA1Q96BD8 255 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ZBTB9Q96C00 473 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ZFP42Q96MM3 310 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 MCEEQ96PE7 176 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 UNC45AQ9H3U1 944 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 FBXO44Q9H4M3 255 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ASB7Q9H672 318 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 TRPM5Q9NZQ8 1165 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 DCTN4Q9UJW0 460 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ITGA11Q9UKX5 1188 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 CLCA2Q9UQC9 943 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 TRAF3IP3Q9Y228 551 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 ALG6Q9Y672 507 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 QRICH2Q9H0J4 1663 aa11.15□□□□□ -0.62
ACTN1-216ENST00000556083 SNUPNO95149 360 aaKnown RBP11.15□□□□□ -0.63
ACTN1-216ENST00000556083 ATP1A1P05023 1023 aaKnown RBP11.15□□□□□ -0.63
ACTN1-216ENST00000556083 GRK3P35626 688 aa11.15□□□□□ -0.63
ACTN1-216ENST00000556083 PEX19P40855 299 aa11.15□□□□□ -0.63
ACTN1-216ENST00000556083 NCALDP61601 193 aa11.15□□□□□ -0.63
ACTN1-216ENST00000556083 MAD2L1Q13257 205 aaPredicted RBP11.15□□□□□ -0.63
ACTN1-216ENST00000556083 GPAT2Q6NUI2 795 aa11.15□□□□□ -0.63
ACTN1-216ENST00000556083 C1orf131Q8NDD1 294 aaKnown RBP11.15□□□□□ -0.63
ACTN1-216ENST00000556083 PABPC5Q96DU9 382 aaKnown RBP11.15□□□□□ -0.63
ACTN1-216ENST00000556083 ASB2Q96Q27 587 aa11.15□□□□□ -0.63
ACTN1-216ENST00000556083 XPO6Q96QU8 1125 aaKnown RBP11.15□□□□□ -0.63
ACTN1-216ENST00000556083 ILKAPQ9H0C8 392 aaPredicted RBP11.15□□□□□ -0.63
ACTN1-216ENST00000556083 SMYD3Q9H7B4 428 aa11.15□□□□□ -0.63
ACTN1-216ENST00000556083 ZC4H2Q9NQZ6 224 aa11.15□□□□□ -0.63
ACTN1-216ENST00000556083 AGPAT3Q9NRZ7 376 aa11.15□□□□□ -0.63
ACTN1-216ENST00000556083 C20orf96Q9NUD7 363 aaPredicted RBP11.15□□□□□ -0.63
ACTN1-216ENST00000556083 TBC1D13Q9NVG8 400 aa11.15□□□□□ -0.63
ACTN1-216ENST00000556083 SLC25A13Q9UJS0 675 aa11.15□□□□□ -0.63
ACTN1-216ENST00000556083 ZNF839A8K0R7 811 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 SRGAP2O75044 1071 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 ZBTB7AO95365 584 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 EZH2Q15910 746 aaKnown RBP11.14□□□□□ -0.63
ACTN1-216ENST00000556083 SLC22A9Q8IVM8 553 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 TMEM143Q96AN5 459 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 E2F7Q96AV8 911 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 VPS50Q96JG6 964 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 VAT1Q99536 393 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 ADGRE3Q9BY15 652 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 CHMP2BQ9UQN3 213 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 CABYRO75952 493 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 CYP2C18P33260 490 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 SERPINB8P50452 374 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 MGAT5BQ3V5L5 792 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 HABP4Q5JVS0 413 aaKnown RBP11.14□□□□□ -0.63
ACTN1-216ENST00000556083 ZNF438Q7Z4V0 828 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 KRT78Q8N1N4 520 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 DDI1Q8WTU0 396 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 CLMNQ96JQ2 1002 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 CCDC90BQ9GZT6 254 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 TMEM161AQ9NX61 479 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 AHSPQ9NZD4 102 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 NAGPAQ9UK23 515 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 TMCO1Q9UM00 188 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 FHOD1Q9Y613 1164 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 CST8O60676 142 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 PIK3CGP48736 1102 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 CREMQ03060 361 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 CDH18Q13634 790 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 LLGL1Q15334 1064 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 ZNF284Q2VY69 593 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 SLC13A5Q86YT5 568 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-216ENST00000556083 EXD1Q8NHP7 514 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 SOCS4Q8WXH5 440 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 VTA1Q9NP79 307 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 DPP3Q9NY33 737 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 UXTQ9UBK9 157 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-216ENST00000556083 MANSC4A6NHS7 340 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-216ENST00000556083 THRAP10827 490 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 HOXB6P17509 224 aaKnown RBP11.14□□□□□ -0.63
ACTN1-216ENST00000556083 COILP38432 576 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-216ENST00000556083 ACOT2P49753 483 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 GMPSP49915 693 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-216ENST00000556083 BACE1P56817 501 aa11.14□□□□□ -0.63
ACTN1-216ENST00000556083 POU4F1Q01851 419 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms