RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 EYA3Q99504 573 aa3.68□□□□□ -1.82
EFCAB11-210ENST00000556078 ZNF768Q9H5H4 540 aaKnown RBP3.68□□□□□ -1.82
EFCAB11-210ENST00000556078 UBE2ZQ9H832 354 aaPredicted RBP3.68□□□□□ -1.82
EFCAB11-210ENST00000556078 CAAP1Q9H8G2 361 aa3.68□□□□□ -1.82
EFCAB11-210ENST00000556078 SLC28A3Q9HAS3 691 aa3.68□□□□□ -1.82
EFCAB11-210ENST00000556078 SMURF1Q9HCE7 757 aa3.68□□□□□ -1.82
EFCAB11-210ENST00000556078 ARHGEF4Q9NR80 690 aa3.68□□□□□ -1.82
EFCAB11-210ENST00000556078 ATP8A1Q9Y2Q0 1164 aa3.68□□□□□ -1.82
EFCAB11-210ENST00000556078 DOCK1Q14185 1865 aa3.68□□□□□ -1.82
EFCAB11-210ENST00000556078 TET1Q8NFU7 2136 aa3.68□□□□□ -1.82
EFCAB11-210ENST00000556078 ZNFX1Q9P2E3 1918 aaKnown RBP3.68□□□□□ -1.82
EFCAB11-210ENST00000556078 MYO7AQ13402 2215 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 NLRC5Q86WI3 1866 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 RPAP1Q9BWH6 1393 aaPredicted RBP3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 HECTD1Q9ULT8 2610 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 TRAV20A0A0B4J274 112 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 CCDC163A0A0D9SF12 145 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 ERVV-1B6SEH8 477 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 H3BQ06 376 aaPredicted RBP3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 AQP7O14520 342 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 GSTA4O15217 222 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 PDE8AO60658 829 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 HKR1P10072 659 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 PYGMP11217 842 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 GNAT2P19087 354 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 PTH2RP49190 550 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 NEK4P51957 841 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 PABPC4Q13310 644 aaKnown RBP eCLIP3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 SPIDRQ14159 915 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 LEXMQ3ZCV2 418 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 HERC4Q5GLZ8 1057 aaPredicted RBP3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 ZC3H12BQ5HYM0 836 aaKnown RBP3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 ZNF365Q70YC5 407 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 CLEC14AQ86T13 490 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 CCAR1Q8IX12 1150 aaKnown RBP3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 PLA2G15Q8NCC3 412 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 HIPK4Q8NE63 616 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 TRPV1Q8NER1 839 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 LEO1Q8WVC0 666 aaPredicted RBP3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 NINJ1Q92982 152 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 ARL8AQ96BM9 186 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 ZNF669Q96BR6 464 aaPredicted RBP3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 TESK2Q96S53 571 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 DHRS4Q9BTZ2 278 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 KCNH7Q9NS40 1196 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 FLRT1Q9NZU1 646 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 ANKFY1Q9P2R3 1169 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 DKK2Q9UBU2 259 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 PPP2R3BQ9Y5P8 575 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 KALRNO60229 2985 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 DOCK2Q92608 1830 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 CDK5RAP2Q96SN8 1893 aa3.67□□□□□ -1.82
EFCAB11-210ENST00000556078 MYH3P11055 1940 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 DLG5Q8TDM6 1919 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 TRBV23-1A0A0A0MS06 115 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 ARVCFO00192 962 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 FOXP2O15409 715 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 PEX14O75381 377 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 RBMXL2O75526 392 aaKnown RBP3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 WDHD1O75717 1129 aaPredicted RBP3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 TOX4O94842 621 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 ZFPL1O95159 310 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 CLTBP09497 229 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 HMOX1P09601 288 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 CSF2RAP15509 400 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 SDHAP31040 664 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 CXCR5P32302 372 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 BLOC1S1P78537 153 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 FOXI1Q12951 378 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 DLGAP5Q15398 846 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 CFAP100Q494V2 611 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 FAM209AQ5JX71 171 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 DDX42Q86XP3 938 aaKnown RBP eCLIP3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 NOSTRINQ8IVI9 506 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 STAG1Q8WVM7 1258 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 SLC9A6Q92581 669 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 COA7Q96BR5 231 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 PARK7Q99497 189 aaKnown RBP3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 FOXB1Q99853 325 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 PDCD2LQ9BRP1 358 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 UTP14AQ9BVJ6 771 aaKnown RBP3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 MYH16Q9H6N6 1097 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 TDRD3Q9H7E2 651 aaKnown RBP3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 GABBR1Q9UBS5 961 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 SFMBT1Q9UHJ3 866 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 MSRAQ9UJ68 235 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 TRAF6Q9Y4K3 522 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 IGF2RP11717 2491 aa3.66□□□□□ -1.82
EFCAB11-210ENST00000556078 CEP295Q9C0D2 2601 aa3.65□□□□□ -1.82
EFCAB11-210ENST00000556078 DOPEY1Q5JWR5 2465 aa3.65□□□□□ -1.82
EFCAB11-210ENST00000556078 GAGE12BA1L429 117 aa3.65□□□□□ -1.83
EFCAB11-210ENST00000556078 GAGE12HA6NDE8 117 aa3.65□□□□□ -1.83
EFCAB11-210ENST00000556078 TCP10L2B9ZVM9 353 aa3.65□□□□□ -1.83
EFCAB11-210ENST00000556078 ALG1L2C9J202 215 aa3.65□□□□□ -1.83
EFCAB11-210ENST00000556078 DNM1LO00429 736 aa3.65□□□□□ -1.83
EFCAB11-210ENST00000556078 RNASET2O00584 256 aaKnown RBP3.65□□□□□ -1.83
EFCAB11-210ENST00000556078 MAP4K4O95819 1239 aaPredicted RBP3.65□□□□□ -1.83
EFCAB11-210ENST00000556078 CA3P07451 260 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms