RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 SHCBP1LQ9BZQ2 653 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 ROPN1BQ9BZX4 212 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 PIF1Q9H611 641 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 PPCSQ9HAB8 311 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 ROPN1Q9HAT0 212 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 CD93Q9NPY3 652 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 NKIRAS1Q9NYS0 192 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 SNX5Q9Y5X3 404 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 LACTBL1A8MY62 500 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 LILRB3O75022 631 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 DCTN3O75935 186 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 KRT10P13645 584 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 KRT4P19013 534 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 RCVRNP35243 200 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 ARHGDIBP52566 201 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 TTLL12Q14166 644 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 EXOC3L4Q17RC7 722 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 HABP4Q5JVS0 413 aaKnown RBP10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 SUSD4Q5VX71 490 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 PPP1R2P3Q6NXS1 205 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 TMTC3Q6ZXV5 915 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 ANO5Q75V66 913 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 SYCE1Q8N0S2 351 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 PSD4Q8NDX1 1056 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 NAT14Q8WUY8 206 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 STMN2Q93045 179 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 CEP95Q96GE4 821 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 TTC1Q99614 292 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 CADM1Q9BY67 442 aaKnown RBP10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 RNF41Q9H4P4 317 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 SLCO1B3Q9NPD5 702 aa10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 AVENQ9NQS1 362 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 RPL26L1Q9UNX3 145 aaKnown RBP10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 NIP7Q9Y221 180 aaKnown RBP eCLIP10.83□□□□□ -0.68
EFCAB11-208ENST00000555872 A6NCN8 305 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 ZSCAN5BA6NJL1 495 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 SNTNA6NMZ2 147 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 H0YC42 278 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 TRAF5O00463 557 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 DDX3XO00571 662 aaKnown RBP eCLIP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 NDC80O14777 642 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 PSMG1O95456 288 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 VAV1P15498 845 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 ATF7P17544 494 aaPredicted RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 HMOX2P30519 316 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 HOXD13P35453 343 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 PHKA1P46020 1223 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 EMP3P54852 163 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 DRG2P55039 364 aaKnown RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 TPD52P55327 224 aaPredicted RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 LMNB2Q03252 620 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 TROAPQ12815 778 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 IFIT5Q13325 482 aaKnown RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 DHX34Q14147 1143 aaKnown RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 ZCWPW2Q504Y3 356 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 CYP4A22Q5TCH4 519 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 MARK2Q7KZI7 788 aaKnown RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 RHOT2Q8IXI1 618 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 SRRM1Q8IYB3 904 aaKnown RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 LCORLQ8N3X6 602 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 ARRDC4Q8NCT1 418 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 TTC25Q96NG3 672 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 OSGEPQ9NPF4 335 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 RIC8AQ9NPQ8 531 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 ARPP21Q9UBL0 812 aaPredicted RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 PHTF1Q9UMS5 762 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 RBMX2Q9Y388 322 aaKnown RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 RWDD3Q9Y3V2 267 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 GPSM3Q9Y4H4 160 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 COL4A3BPQ9Y5P4 624 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 WASF2Q9Y6W5 498 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 FLT1P17948 1338 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 CNTNAP5Q8WYK1 1306 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 TRAFD1O14545 582 aaPredicted RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 EXTL3O43909 919 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 CBFA2T3O75081 653 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 GMNNO75496 209 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 FOSP01100 380 aaPredicted RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 H2AFZP0C0S5 128 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 ACTN1P12814 892 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 ERFP50548 548 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 LRRC63Q05C16 580 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 STRN3Q13033 797 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 AADACL2Q6P093 401 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 RFX8Q6ZV50 586 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 H2AFVQ71UI9 128 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 PODNQ7Z5L7 613 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 IRF2BP2Q7Z5L9 587 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 SYTL1Q8IYJ3 562 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 FAM186BQ8IYM0 893 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 BLIDQ8IZY5 108 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 SERPINB12Q96P63 405 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 ZSCAN10Q96SZ4 725 aaPredicted RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 WDR6Q9NNW5 1121 aaKnown RBP10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 RNF112Q9ULX5 631 aa10.82□□□□□ -0.68
EFCAB11-208ENST00000555872 S100BP04271 92 aaPredicted RBP10.81□□□□□ -0.68
EFCAB11-208ENST00000555872 PTPN2P17706 415 aa10.81□□□□□ -0.68
EFCAB11-208ENST00000555872 EPS15P42566 896 aa10.81□□□□□ -0.68
EFCAB11-208ENST00000555872 RFTN1Q14699 578 aaPredicted RBP10.81□□□□□ -0.68
EFCAB11-208ENST00000555872 PPP2R5EQ16537 467 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms