RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 CHST3Q7LGC8 479 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 TMC6Q7Z403 805 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 ZNF605Q86T29 641 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 SKAP1Q86WV1 359 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 NOSTRINQ8IVI9 506 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 ZNF713Q8N859 430 aaPredicted RBP4.73□□□□□ -1.65
CPSF2-204ENST00000555244 CTCFLQ8NI51 663 aaPredicted RBP4.73□□□□□ -1.65
CPSF2-204ENST00000555244 BADQ92934 168 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 CHMP4CQ96CF2 233 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 TOE1Q96GM8 510 aaKnown RBP4.73□□□□□ -1.65
CPSF2-204ENST00000555244 INPP4AQ96PE3 977 aaPredicted RBP4.73□□□□□ -1.65
CPSF2-204ENST00000555244 PIGSQ96S52 555 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 LBHD1Q9BQE6 289 aaPredicted RBP4.73□□□□□ -1.65
CPSF2-204ENST00000555244 SENP7Q9BQF6 1050 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 MTG1Q9BT17 334 aaPredicted RBP4.73□□□□□ -1.65
CPSF2-204ENST00000555244 TM6SF1Q9BZW5 370 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 EPB41L4BQ9H329 900 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 VAT1LQ9HCJ6 419 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 TYW1Q9NV66 732 aaKnown RBP4.73□□□□□ -1.65
CPSF2-204ENST00000555244 RBM28Q9NW13 759 aaKnown RBP4.73□□□□□ -1.65
CPSF2-204ENST00000555244 OXSMQ9NWU1 459 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 ISY1Q9ULR0 285 aaKnown RBP4.73□□□□□ -1.65
CPSF2-204ENST00000555244 ATP11BQ9Y2G3 1177 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 SPO11Q9Y5K1 396 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 B3GALT1Q9Y5Z6 326 aa4.73□□□□□ -1.65
CPSF2-204ENST00000555244 DDX49Q9Y6V7 483 aaKnown RBP4.73□□□□□ -1.65
CPSF2-204ENST00000555244 CCDC69A6NI79 296 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 MAFGO15525 162 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 GPR39O43194 453 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 BUB1BO60566 1050 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 PQBP1O60828 265 aaKnown RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 REC8O95072 547 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 CFBP00751 764 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 GH1P01241 217 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 LTFP02788 710 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 NCAM1P13591 858 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 VIPR1P32241 457 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 EPHB4P54760 987 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 MRPS9P82933 396 aaKnown RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 SRSF3P84103 164 aaKnown RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 TMPRSS15P98073 1019 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 BEX3Q00994 111 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 SP2Q02086 613 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 PPIGQ13427 754 aaKnown RBP eCLIP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 PGM5Q15124 567 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 SHHQ15465 462 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 TARBP2Q15633 366 aaKnown RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 ADCK5Q3MIX3 580 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 PAN2Q504Q3 1202 aaKnown RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 CELF3Q5SZQ8 465 aaKnown RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 ARHGEF16Q5VV41 709 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 CPZQ66K79 652 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 ZC3H18Q86VM9 953 aaKnown RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 MIB1Q86YT6 1006 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 RBM12BQ8IXT5 1001 aaKnown RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 ZZZ3Q8IYH5 903 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 KIAA1958Q8N8K9 716 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 OR6J1Q8NGC5 347 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 PPTC7Q8NI37 304 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 KAT2BQ92831 832 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 RRP36Q96EU6 259 aaKnown RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 CTAGE1Q96RT6 745 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 CEP89Q96ST8 783 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 FAM126AQ9BYI3 521 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 GLT8D2Q9H1C3 349 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 ALDH8A1Q9H2A2 487 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-204ENST00000555244 EMC7Q9NPA0 242 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 DTLQ9NZJ0 730 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 SNX14Q9Y5W7 946 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 MYH6P13533 1939 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 KIAA1217Q5T5P2 1943 aa4.72□□□□□ -1.65
CPSF2-204ENST00000555244 UNC80Q8N2C7 3258 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 PRUNE2Q8WUY3 3088 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 CCDC196A0A1B0GTZ2 297 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.71□□□□□ -1.66
CPSF2-204ENST00000555244 ESYT2A0FGR8 921 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 PRAMEF25A6NGN4 478 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 ZBTB43O43298 467 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 DHX16O60231 1041 aaKnown RBP4.71□□□□□ -1.66
CPSF2-204ENST00000555244 B4GALT4O60513 344 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 PLEKHA8P1O95397 391 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 PARNO95453 639 aaKnown RBP4.71□□□□□ -1.66
CPSF2-204ENST00000555244 FOSP01100 380 aaPredicted RBP4.71□□□□□ -1.66
CPSF2-204ENST00000555244 PFKMP08237 780 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 MMP3P08254 477 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 C1QTNF9P0C862 333 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 FAHP16930 419 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 PFKLP17858 780 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 SLC9A1P19634 815 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 CASTP20810 708 aaKnown RBP4.71□□□□□ -1.66
CPSF2-204ENST00000555244 PTGS1P23219 599 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 RPS6KB1P23443 525 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 PSMA5P28066 241 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 CCND2P30279 289 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 SDHAP31040 664 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 RFC2P35250 354 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 FNTBP49356 437 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 CDKN1CP49918 316 aaPredicted RBP4.71□□□□□ -1.66
CPSF2-204ENST00000555244 GUCY2FP51841 1108 aa4.71□□□□□ -1.66
CPSF2-204ENST00000555244 ADAM17P78536 824 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms