RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 GET4Q7L5D6 327 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-217ENST00000555116 UNC93AQ86WB7 457 aa15.15■□□□□ 0.02
SHMT2-217ENST00000555116 RNF135Q8IUD6 432 aa15.15■□□□□ 0.02
SHMT2-217ENST00000555116 LMO3Q8TAP4 145 aa15.15■□□□□ 0.02
SHMT2-217ENST00000555116 PCED1BQ96HM7 432 aa15.15■□□□□ 0.02
SHMT2-217ENST00000555116 FUCA2Q9BTY2 467 aa15.15■□□□□ 0.02
SHMT2-217ENST00000555116 MAGEC2Q9UBF1 373 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-217ENST00000555116 ASB3Q9Y575 518 aa15.15■□□□□ 0.02
SHMT2-217ENST00000555116 NRG2O14511 850 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-217ENST00000555116 CCR2P41597 374 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 MAGEA11P43364 429 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 IQCEQ6IPM2 695 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 DNAJB7Q7Z6W7 309 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-217ENST00000555116 TMC8Q8IU68 726 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 CRYBG2Q8N1P7 616 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 ENOX1Q8TC92 643 aaKnown RBP15.14■□□□□ 0.01
SHMT2-217ENST00000555116 WHAMMQ8TF30 809 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 KHSRPQ92945 711 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHMT2-217ENST00000555116 PSMG2Q969U7 264 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 ACSF2Q96CM8 615 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-217ENST00000555116 TWNKQ96RR1 684 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHMT2-217ENST00000555116 ANAPC1Q9H1A4 1944 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 CILPO75339 1184 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 MOSPD3O75425 235 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 GBP2P32456 591 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-217ENST00000555116 TYRO3Q06418 890 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 ORC1Q13415 861 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 POTEHQ6S545 545 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 ACOT1Q86TX2 421 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 FAM114A1Q8IWE2 563 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 LEMD2Q8NC56 503 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 GIPC2Q8TF65 315 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 TCEAL4Q96EI5 215 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 PDLIM2Q96JY6 352 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 TNIP3Q96KP6 325 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 ARID3AQ99856 593 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 B3GNT5Q9BYG0 378 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 ZNF334Q9HCZ1 680 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-217ENST00000555116 SAMSN1Q9NSI8 373 aaKnown RBP15.14■□□□□ 0.01
SHMT2-217ENST00000555116 EPS15L1Q9UBC2 864 aa15.14■□□□□ 0.01
SHMT2-217ENST00000555116 MRPS23Q9Y3D9 190 aaKnown RBP15.14■□□□□ 0.01
SHMT2-217ENST00000555116 CD58P19256 250 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 BDNFP23560 247 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 RPL10AP62906 217 aaKnown RBP15.13■□□□□ 0.01
SHMT2-217ENST00000555116 CYP27A1Q02318 531 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 DDR2Q16832 855 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 SDHAF4Q5VUM1 108 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 ITIH5Q86UX2 942 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 CREBRFQ8IUR6 639 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 NPAS3Q8IXF0 933 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 EHBP1Q8NDI1 1231 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 FAM200AQ8TCP9 573 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 GPR152Q8TDT2 470 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 FGF13Q92913 245 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 ZNF518BQ9C0D4 1074 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 ELOVL4Q9GZR5 314 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 ASAH2Q9NR71 780 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 LIMD1Q9UGP4 676 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 CDH7Q9ULB5 785 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 NFE2L3Q9Y4A8 694 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
SHMT2-217ENST00000555116 CLDN5O00501 218 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 MICAL2O94851 1124 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 MYL4P12829 197 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 LAMP2P13473 410 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 HMGA1P17096 107 aaKnown RBP15.12■□□□□ 0.01
SHMT2-217ENST00000555116 CEBPBP17676 345 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 MTIF2P46199 727 aaKnown RBP15.12■□□□□ 0.01
SHMT2-217ENST00000555116 CETN1Q12798 172 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 LRMPQ12912 555 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 CUL2Q13617 745 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 VEPH1Q14D04 833 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 HSP90AA4PQ58FG1 418 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 CYP4A22Q5TCH4 519 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 VSTM1Q6UX27 236 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 PAQR9Q6ZVX9 377 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 PDZD4Q76G19 769 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-217ENST00000555116 UBR7Q8N806 425 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 ING5Q8WYH8 240 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 NT5C1BQ96P26 610 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 NT5C1AQ9BXI3 368 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 FAM124BQ9H5Z6 455 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-217ENST00000555116 CISHQ9NSE2 258 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 TMEM30AQ9NV96 361 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 ZFP37Q9Y6Q3 630 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-217ENST00000555116 ZNF197O14709 1029 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 CACNA2D1P54289 1103 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 MAN2A1Q16706 1144 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 SCN4BQ8IWT1 228 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 FUKQ8N0W3 1084 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 STKLD1Q8NE28 680 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 SHKBP1Q8TBC3 707 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 TRIM44Q96DX7 344 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-217ENST00000555116 IL21Q9HBE4 155 aa15.12■□□□□ 0.01
SHMT2-217ENST00000555116 NUP210Q8TEM1 1887 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-217ENST00000555116 KCNJ18B7U540 433 aa15.11■□□□□ 0.01
SHMT2-217ENST00000555116 NOL4O94818 638 aa15.11■□□□□ 0.01
SHMT2-217ENST00000555116 MTMR3Q13615 1198 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms