RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 TDP1Q9NUW8 608 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 PANK4Q9NVE7 773 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 ANAPC1Q9H1A4 1944 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 PRPF6O94906 941 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 NASPP49321 788 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 RBP5P82980 135 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 MYL7Q01449 175 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 SPEM2Q0P670 501 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 RUNX3Q13761 415 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 SIM2Q14190 667 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 DDR2Q16832 855 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 CFAP221Q4G0U5 840 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 TMEM196Q5HYL7 178 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 TRIM68Q6AZZ1 485 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 FSTL4Q6MZW2 842 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 PKN3Q6P5Z2 889 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 WDR5BQ86VZ2 330 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 ADGRF2Q8IZF7 708 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 GLIS3Q8NEA6 775 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 MRPS31Q92665 395 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 EBF3Q9H4W6 596 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 PCIF1Q9H4Z3 704 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 TMEM206Q9H813 350 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 GTF3C4Q9UKN8 822 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 CDV3Q9UKY7 258 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 SNX9Q9Y5X1 595 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 PTPRJQ12913 1337 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 GREB1Q4ZG55 1949 aa16.84■□□□□ 0.29
ARHGEF40-205ENST00000555052 CFAP47Q6ZTR5 3102 aa16.83■□□□□ 0.29
ARHGEF40-205ENST00000555052 TRDMT1O14717 391 aaKnown RBP16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 KIAA0391O15091 583 aaKnown RBP16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 HCRTO43612 131 aa16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 ARSAP15289 507 aa16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 PTPRDP23468 1912 aa16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 LHX1P48742 406 aa16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 RPL10AP62906 217 aaKnown RBP16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 E2F4Q16254 413 aa16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 SOWAHAQ2M3V2 549 aa16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 LMBRD2Q68DH5 695 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 HEATR6Q6AI08 1181 aaKnown RBP16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 GPD1LQ8N335 351 aa16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 OR5B17Q8NGF7 314 aa16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 FUBP3Q96I24 572 aaKnown RBP eCLIP16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 RTKNQ9BST9 563 aa16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 INTS13Q9NVM9 706 aa16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 UXTQ9UBK9 157 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 MAGED2Q9UNF1 606 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-205ENST00000555052 KRT19P08727 400 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 TMEM191BP0C7N4 346 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 PCSK1P29120 753 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 HOXD13P35453 343 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 MAGEA11P43364 429 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 FAM171BQ6P995 826 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 CBWD2Q8IUF1 395 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 CCDC65Q8IXS2 484 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 PDILTQ8N807 584 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 LINC00301Q8NCQ3 95 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 KBTBD7Q8WVZ9 684 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 SLC22A12Q96S37 553 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 TNMDQ9H2S6 317 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 ZSCAN16Q9H4T2 348 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 SEMA4GQ9NTN9 838 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 KBTBD4Q9NVX7 518 aa16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-205ENST00000555052 FAM160A1Q05DH4 1040 aa16.81■□□□□ 0.28
ARHGEF40-205ENST00000555052 GRSF1Q12849 480 aaKnown RBP eCLIP16.81■□□□□ 0.28
ARHGEF40-205ENST00000555052 USP4Q13107 963 aa16.81■□□□□ 0.28
ARHGEF40-205ENST00000555052 PDGFRLQ15198 375 aa16.81■□□□□ 0.28
ARHGEF40-205ENST00000555052 ZNF77Q15935 545 aa16.81■□□□□ 0.28
ARHGEF40-205ENST00000555052 DPH6Q7L8W6 267 aa16.81■□□□□ 0.28
ARHGEF40-205ENST00000555052 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF40-205ENST00000555052 NOC3LQ8WTT2 800 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-205ENST00000555052 HPS3Q969F9 1004 aa16.81■□□□□ 0.28
ARHGEF40-205ENST00000555052 ANKRD36BP1Q96IX9 119 aa16.81■□□□□ 0.28
ARHGEF40-205ENST00000555052 TRIM9Q9C026 710 aa16.81■□□□□ 0.28
ARHGEF40-205ENST00000555052 EML5Q05BV3 1969 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 CCDC163A0A0D9SF12 145 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 ZNF233A6NK53 670 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 TULP1O00294 542 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 ZZEF1O43149 2961 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 STX6O43752 255 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 EGFP01133 1207 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 MYO1EQ12965 1108 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 MTF1Q14872 753 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 CSRP2Q16527 193 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 NAIF1Q69YI7 327 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 CNNM4Q6P4Q7 775 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 PRR23CQ6ZRP0 262 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 EPM2AIP1Q7L775 607 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 SPATA2LQ8IUW3 424 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 FAM160A2Q8N612 972 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 NETO1Q8TDF5 533 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 HPDLQ96IR7 371 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 SYT15Q9BQS2 421 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 FBRSL1Q9HCM7 1045 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 CRTAC1Q9NQ79 661 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 HSPBP1Q9NZL4 362 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 GCNT4Q9P109 453 aa16.8■□□□□ 0.28
ARHGEF40-205ENST00000555052 HELZP42694 1942 aaKnown RBP16.79■□□□□ 0.28
ARHGEF40-205ENST00000555052 TRAV19A0A0A6YYK7 116 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms