RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 MAGEC2Q9UBF1 373 aaPredicted RBP13.19□□□□□ -0.3
CCDC85C-202ENST00000554877 CHADO15335 359 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 GADD45BO75293 160 aaPredicted RBP13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 ZNF202O95125 648 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 LMNAP02545 664 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 F11P03951 625 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 MYL1P05976 194 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 CSH1P0DML2 217 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 CSH2P0DML3 217 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 BDNFP23560 247 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 NLRP12P59046 1061 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 MYL6P60660 151 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 TNNC1P63316 161 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 IFRD2Q12894 506 aaPredicted RBP13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 STK4Q13043 487 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 MTAPQ13126 283 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 PSMD6Q15008 389 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 WDR72Q3MJ13 1102 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 ZC3H14Q6PJT7 736 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 MAML2Q8IZL2 1156 aaPredicted RBP13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 SPATA20Q8TB22 786 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 BPIFB1Q8TDL5 484 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 TMEM174Q8WUU8 243 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 ATRIPQ8WXE1 791 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 ZNF516Q92618 1163 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 MRPS31Q92665 395 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 CYP2S1Q96SQ9 504 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 CGRRF1Q99675 332 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 MRPL45Q9BRJ2 306 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 MKNK1Q9BUB5 465 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 OSBPL6Q9BZF3 934 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.18□□□□□ -0.37e-8■■■■■ 186.3
CCDC85C-202ENST00000554877 GKN1Q9NS71 199 aa13.18□□□□□ -0.3
CCDC85C-202ENST00000554877 UBE4BO95155 1302 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 SHISA7A6NL88 538 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 ABL1P00519 1130 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 HMGA1P17096 107 aaKnown RBP13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 PON2Q15165 354 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 ARHGAP29Q52LW3 1261 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 MDH1BQ5I0G3 518 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 CEP135Q66GS9 1140 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 CC2D1AQ6P1N0 951 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 C4orf50Q6ZRC1 276 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 CMTM8Q8IZV2 173 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 CELF5Q8N6W0 485 aaKnown RBP13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 KBTBD7Q8WVZ9 684 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 MYLPFQ96A32 169 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 CLDN23Q96B33 292 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 GZF1Q9H116 711 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 CDH9Q9ULB4 789 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 MAPK8IP1Q9UQF2 711 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 CCL26Q9Y258 94 aa13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 PTPRZ1P23471 2315 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-202ENST00000554877 A8MXQ7 604 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 SPECC1L-ADORA2AF8WAN1 911 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 GABRDO14764 452 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 KINO60870 393 aaKnown RBP13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 RHOBTB3O94955 611 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 RPN1P04843 607 aaKnown RBP13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 ANXA13P27216 316 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 ANP32AP39687 249 aaKnown RBP13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 CDH8P55286 799 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 FAM160A1Q05DH4 1040 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 FZD5Q13467 585 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 TRIM68Q6AZZ1 485 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 SCARA5Q6ZMJ2 495 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 DPH6Q7L8W6 267 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 TMEM150AQ86TG1 271 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 KIAA2013Q8IYS2 634 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 DCLK2Q8N568 766 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 CCDC47Q96A33 483 aaKnown RBP13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 KCTD10Q9H3F6 313 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 EBF3Q9H4W6 596 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 C8orf33Q9H7E9 229 aaPredicted RBP13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 CRTAC1Q9NQ79 661 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 TDP1Q9NUW8 608 aa13.16□□□□□ -0.3
CCDC85C-202ENST00000554877 CACNA1IQ9P0X4 2223 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 PTPN1P18031 435 aaKnown RBP13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 WARSP23381 471 aaKnown RBP13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 MAGEA9P43362 315 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 RPS9P46781 194 aaKnown RBP13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 RAP1GAPP47736 663 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 SNRPFP62306 86 aaKnown RBP13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 FCHO2Q0JRZ9 810 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 PSMD2Q13200 908 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 KCNB1Q14721 858 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 LPAL2Q16609 132 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 HEATR6Q6AI08 1181 aaKnown RBP13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 FAM171BQ6P995 826 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 TXNDC11Q6PKC3 985 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 MON1AQ86VX9 555 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 C12orf56Q8IXR9 622 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 ELOA2Q8IYF1 753 aaPredicted RBP13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 ARL14EPQ8N8R7 260 aaPredicted RBP13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 PLEKHO2Q8TD55 490 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 USP13Q92995 863 aaPredicted RBP13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 TIGD1Q96MW7 591 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 PKMYT1Q99640 499 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 MED10Q9BTT4 135 aa13.15□□□□□ -0.3
CCDC85C-202ENST00000554877 DPEP3Q9H4B8 488 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms