RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 USP19O94966 1318 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 SALL3Q9BXA9 1300 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 ZAR1LA6NP61 321 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 PLA2G5P39877 138 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 GRIA3P42263 894 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 ZNF134P52741 427 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 INHBEP58166 350 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 SIM1P81133 766 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-214ENST00000554819 SMN1Q16637 294 aaKnown RBP4.95□□□□□ -1.62
SCFD1-214ENST00000554819 HSP90AB2PQ58FF8 381 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 PLAC9Q5JTB6 97 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 VPS53Q5VIR6 699 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 DTX2Q86UW9 622 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 GAS2L3Q86XJ1 694 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 MPP5Q8N3R9 675 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 ATRIPQ8WXE1 791 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 TFAP2BQ92481 460 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 FKBP10Q96AY3 582 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 ZG16BQ96DA0 208 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 PBKQ96KB5 322 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 MESP1Q9BRJ9 268 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 DUSP26Q9BV47 211 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 BHMT2Q9H2M3 363 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 RIOX1Q9H6W3 641 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 SMURF2Q9HAU4 748 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 ZNF287Q9HBT7 754 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 SACM1LQ9NTJ5 587 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 EHD3Q9NZN3 535 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 C11orf21Q9P2W6 132 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 CPNE7Q9UBL6 633 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 AFF4Q9UHB7 1163 aaKnown RBP4.95□□□□□ -1.62
SCFD1-214ENST00000554819 TLK1Q9UKI8 766 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 INSL6Q9Y581 213 aa4.95□□□□□ -1.62
SCFD1-214ENST00000554819 WDR27A2RRH5 827 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 ADM5C9JUS6 153 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 KIAA0355O15063 1070 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 TLR5O60602 858 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 NXPH3O95157 252 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 MAP4K4O95819 1239 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-214ENST00000554819 BMP5P22003 454 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 PEX2P28328 305 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 FMO1Q01740 532 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 KRT17Q04695 432 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 SEMA5AQ13591 1074 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 BMPR2Q13873 1038 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 TXNRD1Q16881 649 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 ARHGAP40Q5TG30 622 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 STRIP1Q5VSL9 837 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 GRASPQ7Z6J2 395 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-214ENST00000554819 SIMC1Q8NDZ2 872 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 NMD3Q96D46 503 aaKnown RBP4.94□□□□□ -1.62
SCFD1-214ENST00000554819 MS4A7Q9GZW8 240 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-214ENST00000554819 NUP62CLQ9H1M0 184 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 SLC17A6Q9P2U8 582 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 NDRG4Q9ULP0 352 aaKnown RBP4.94□□□□□ -1.62
SCFD1-214ENST00000554819 ADGRA2Q96PE1 1338 aa4.94□□□□□ -1.62
SCFD1-214ENST00000554819 TRIM43BA6NCK2 446 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 MBD3L4A6NDZ8 208 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-214ENST00000554819 MBD3L3A6NE82 208 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-214ENST00000554819 PPM1DO15297 605 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 NUDT3O95989 172 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 ZKSCAN1P17029 563 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-214ENST00000554819 MAPK10P53779 464 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 CACNA2D1P54289 1103 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 TBCCQ15814 346 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 CYB5RLQ6IPT4 315 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 PEG10Q86TG7 708 aaKnown RBP4.93□□□□□ -1.62
SCFD1-214ENST00000554819 SPSB4Q96A44 273 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 TRIM43Q96BQ3 446 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-214ENST00000554819 TIFAQ96CG3 184 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 SYNPO2LQ9H987 977 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 XPNPEP3Q9NQH7 507 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 DDX21Q9NR30 783 aaKnown RBP eCLIP4.93□□□□□ -1.62
SCFD1-214ENST00000554819 SERTAD3Q9UJW9 196 aa4.93□□□□□ -1.62
SCFD1-214ENST00000554819 GCOM1H8Y6P7 765 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-214ENST00000554819 PYCARD-AS1I3L0S3 204 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 SLC16A3O15427 465 aaKnown RBP4.92□□□□□ -1.62
SCFD1-214ENST00000554819 URI1O94763 535 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-214ENST00000554819 TTLL1O95922 423 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 ONECUT2O95948 504 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 RHOP08100 348 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 NR2F6P10588 404 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 ZFXP17010 805 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-214ENST00000554819 KLRC1P26715 233 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 ALDH9A1P49189 494 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 DGKEP52429 567 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 MYO1EQ12965 1108 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 GALEQ14376 348 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 INSCQ1MX18 579 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 PLA1AQ53H76 456 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 ZNF618Q5T7W0 954 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 RGS7BPQ6MZT1 257 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-214ENST00000554819 MICU3Q86XE3 530 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 ZNF280BQ86YH2 543 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 SLC15A3Q8IY34 581 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 RAPGEF4Q8WZA2 1011 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 PPP1R9BQ96SB3 815 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 BTBD1Q9H0C5 482 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 STK32BQ9NY57 414 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms