RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 SAAL1Q96ER3 474 aa13.41□□□□□ -0.26
RDH11-207ENST00000554731 TRMT2BQ96GJ1 504 aaKnown RBP13.41□□□□□ -0.26
RDH11-207ENST00000554731 P2RY13Q9BPV8 354 aa13.41□□□□□ -0.26
RDH11-207ENST00000554731 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
RDH11-207ENST00000554731 DDX43Q9NXZ2 648 aaKnown RBP13.41□□□□□ -0.26
RDH11-207ENST00000554731 RBAKQ9NYW8 714 aaPredicted RBP13.41□□□□□ -0.26
RDH11-207ENST00000554731 TBC1D7Q9P0N9 293 aa13.41□□□□□ -0.26
RDH11-207ENST00000554731 ITGA11Q9UKX5 1188 aa13.41□□□□□ -0.26
RDH11-207ENST00000554731 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
RDH11-207ENST00000554731 ATG2BQ96BY7 2078 aa13.41□□□□□ -0.26
RDH11-207ENST00000554731 ZNF638Q14966 1978 aaKnown RBP13.4□□□□□ -0.26
RDH11-207ENST00000554731 VPS37CA5D8V6 355 aaPredicted RBP13.4□□□□□ -0.26
RDH11-207ENST00000554731 MYMKA6NI61 221 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 TADA3O75528 432 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 KRT37O76014 449 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 NOL4O94818 638 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 GARTP22102 1010 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 ACAT1P24752 427 aaKnown RBP13.4□□□□□ -0.26
RDH11-207ENST00000554731 PCSK1P29120 753 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 TXLNAP40222 546 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 GALK1P51570 392 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 WNT7BP56706 349 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 FAM160A1Q05DH4 1040 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 ALCAMQ13740 583 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 MTF1Q14872 753 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 CCDC6Q16204 474 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 RRAGBQ5VZM2 374 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 SPATA2LQ8IUW3 424 aaPredicted RBP13.4□□□□□ -0.26
RDH11-207ENST00000554731 SYCP3Q8IZU3 236 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 TTC16Q8NEE8 873 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 ZSWIM2Q8NEG5 633 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 RIN3Q8TB24 985 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 SPATA18Q8TC71 538 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 DNAJC19Q96DA6 116 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 MYRFLQ96LU7 910 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 TMEM206Q9H813 350 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 TRPC7Q9HCX4 862 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 GDAP2Q9NXN4 497 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 GTF3C4Q9UKN8 822 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 PCDHGA5Q9Y5G8 931 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 CLIC4Q9Y696 253 aa13.4□□□□□ -0.26
RDH11-207ENST00000554731 DENND4CQ5VZ89 1909 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 TRAV19A0A0A6YYK7 116 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 GOLGA8IPA6NC78 632 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 GOLGA8JA6NMD2 632 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 CKMP06732 381 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 KRT19P08727 400 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 USP17L7P0C7H9 530 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 IDEP14735 1019 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 GJA4P35212 333 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 IFNAR2P48551 515 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 LHX1P48742 406 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 RBP5P82980 135 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 ZNF77Q15935 545 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 CFAP221Q4G0U5 840 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 ADGRF2Q8IZF7 708 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 TOP6BLQ8N6T0 577 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 FSIP1Q8NA03 581 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
RDH11-207ENST00000554731 OSCP1Q8WVF1 389 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 ATP2A3Q93084 1043 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 FUBP3Q96I24 572 aaKnown RBP eCLIP13.39□□□□□ -0.27
RDH11-207ENST00000554731 HHIPQ96QV1 700 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 PKMYT1Q99640 499 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 ECT2Q9H8V3 914 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 FBRSL1Q9HCM7 1045 aaKnown RBP13.39□□□□□ -0.27
RDH11-207ENST00000554731 OLFML3Q9NRN5 406 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 DUS2Q9NX74 493 aaKnown RBP13.39□□□□□ -0.27
RDH11-207ENST00000554731 FBXO2Q9UK22 296 aaPredicted RBP13.39□□□□□ -0.27
RDH11-207ENST00000554731 R3HCC1Q9Y3T6 440 aaKnown RBP13.39□□□□□ -0.27
RDH11-207ENST00000554731 SRPRBQ9Y5M8 271 aaKnown RBP13.39□□□□□ -0.27
RDH11-207ENST00000554731 SNX9Q9Y5X1 595 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 GREB1Q4ZG55 1949 aa13.39□□□□□ -0.27
RDH11-207ENST00000554731 TMEM191BP0C7N4 346 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 PDCP20941 246 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 MPLP40238 635 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 CASP5P51878 434 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 MYO1EQ12965 1108 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 USP4Q13107 963 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 NR1H3Q13133 447 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 ST3GAL2Q16842 350 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 NAIF1Q69YI7 327 aaPredicted RBP13.38□□□□□ -0.27
RDH11-207ENST00000554731 CCDC73Q6ZRK6 1079 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 SYT13Q7L8C5 426 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 OSTM1Q86WC4 334 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 SCN4BQ8IWT1 228 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 RPLP0P6Q8NHW5 317 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 CXorf38Q8TB03 319 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 CD101Q93033 1021 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 ACDQ96AP0 544 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 CHAMP1Q96JM3 812 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 ZC3H10Q96K80 434 aaKnown RBP13.38□□□□□ -0.27
RDH11-207ENST00000554731 FAM84AQ96KN4 292 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 CLIC6Q96NY7 704 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 SLC22A12Q96S37 553 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 CYP2S1Q96SQ9 504 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 CBWD1Q9BRT8 395 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 MTMR12Q9C0I1 747 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 PDE11AQ9HCR9 933 aa13.38□□□□□ -0.27
RDH11-207ENST00000554731 POLR3BQ9NW08 1133 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms