RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 EPG5Q9HCE0 2579 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 TRDMT1O14717 391 aaKnown RBP13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 HUS1O60921 280 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 NOL4O94818 638 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 CSH1P0DML2 217 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 CSH2P0DML3 217 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 ARSAP15289 507 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 DDX6P26196 483 aaKnown RBP eCLIP13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 STAT6P42226 847 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 RBP5P82980 135 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 TSPY1Q01534 308 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 LMNB2Q03252 620 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 BFSP1Q12934 665 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 SIM2Q14190 667 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 TAF12Q16514 161 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 NFE2Q16621 373 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 HEATR6Q6AI08 1181 aaKnown RBP13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 FSTL4Q6MZW2 842 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 FAM171BQ6P995 826 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 PRR23BQ6ZRT6 265 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 LONP2Q86WA8 852 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 SYCP3Q8IZU3 236 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 TMEM86AQ8N2M4 240 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 OR5B17Q8NGF7 314 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 HPS3Q969F9 1004 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 MYRFLQ96LU7 910 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 GCNAQ96QF7 691 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 SLC22A12Q96S37 553 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 CYP2S1Q96SQ9 504 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 MTMR12Q9C0I1 747 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 EBF3Q9H4W6 596 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 ABCB6Q9NP58 842 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 ITGA11Q9UKX5 1188 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 RAB23Q9ULC3 237 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 MAGED2Q9UNF1 606 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 NUP205Q92621 2012 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 DCDC2BA2VCK2 349 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 LRP3O75074 770 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 ATP2C2O75185 946 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 SDHBP21912 280 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 LMO2P25791 158 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 CNR2P34972 360 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 AVPR1AP37288 418 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 TXLNAP40222 546 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 NASPP49321 788 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 ALCAMQ13740 583 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 ZNF268Q14587 947 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 E2F4Q16254 413 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 NAIF1Q69YI7 327 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 WDR5BQ86VZ2 330 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 TOP6BLQ8N6T0 577 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 PDILTQ8N807 584 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 LINC00301Q8NCQ3 95 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 SPATA18Q8TC71 538 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 TRMT2BQ96GJ1 504 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 INTS4Q96HW7 963 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 TMEM206Q9H813 350 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 INTS13Q9NVM9 706 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 KBTBD4Q9NVX7 518 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 POLR3BQ9NW08 1133 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 SNX9Q9Y5X1 595 aa13.12□□□□□ -0.31
MTHFD1-207ENST00000554677 EGFP01133 1207 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 LHX1P48742 406 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 GALK1P51570 392 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 RPL10AP62906 217 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 MYL7Q01449 175 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 CFAP221Q4G0U5 840 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 CBWD2Q8IUF1 395 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 ADGRF2Q8IZF7 708 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 MRPS31Q92665 395 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 EZH1Q92800 747 aaPredicted RBP13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 RTKNQ9BST9 563 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 SEMA4GQ9NTN9 838 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 GCNT4Q9P109 453 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 NME7Q9Y5B8 376 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 MAP1BP46821 2468 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 MYH10P35580 1976 aa13.11□□□□□ -0.31
MTHFD1-207ENST00000554677 PI4KAP42356 2102 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 GDF9O60383 454 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 CST3P01034 146 aaPredicted RBP13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 KRT19P08727 400 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 GJA4P35212 333 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 MAGEA11P43364 429 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 ZXDBP98169 803 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 ZNF77Q15935 545 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 CSRP2Q16527 193 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 EPM2AIP1Q7L775 607 aaPredicted RBP13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 DPH6Q7L8W6 267 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 CCDC65Q8IXS2 484 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 ZNF507Q8TCN5 953 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 NOC3LQ8WTT2 800 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 FUBP3Q96I24 572 aaKnown RBP eCLIP13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 HPDLQ96IR7 371 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 TRIM9Q9C026 710 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 ZSCAN16Q9H4T2 348 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms