RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 RSRP1Q9BUV0 290 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 ANO3Q9BYT9 981 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 GBP3Q9H0R5 595 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 GLT8D2Q9H1C3 349 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 PARD6AQ9NPB6 346 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 LTB4R2Q9NPC1 389 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 RIC8AQ9NPQ8 531 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 GABBR1Q9UBS5 961 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 REV1Q9UBZ9 1251 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 DNAJB4Q9UDY4 337 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 EBF1Q9UH73 591 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 RALYQ9UKM9 306 aaKnown RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 INPP5FQ9Y2H2 1132 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 MRPS17Q9Y2R5 130 aaKnown RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 MTF2Q9Y483 593 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 MYO10Q9HD67 2058 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 GPR179Q6PRD1 2367 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 MYH7BA7E2Y1 1941 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 ACACBO00763 2458 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 ZFHX4Q86UP3 3567 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 OTOGLQ3ZCN5 2332 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 hCG_1642624A0A1W2PR95 340 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 CCDC69A6NI79 296 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 FAM86B1E9PN63 330 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 CSDE1O75534 798 aaKnown RBP5.4□□□□□ -1.54
ATXN3-229ENST00000554672 CYP3A4P08684 503 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 FAM86B2P0C5J1 330 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 ZGLP1P0C6A0 271 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 SPATA31D3P0C874 917 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 MYBP10242 640 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 GARTP22102 1010 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 PMLP29590 882 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 SREBF1P36956 1147 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 GLUD2P49448 558 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 DNM2P50570 870 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 SHC2P98077 582 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 DSG1Q02413 1049 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 PPP2R5DQ14738 602 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 ACAP1Q15027 740 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 CSRP2Q16527 193 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 KRTAP19-4Q3LI73 84 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 LAIR1Q6GTX8 287 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 LILRA6Q6PI73 481 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 TSSK4Q6SA08 328 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 CASC1Q6TDU7 716 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 PARM1Q6UWI2 310 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 ZNF852Q6ZMS4 543 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 SPATA31D4Q6ZUB0 917 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 MTSS1LQ765P7 747 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 GET4Q7L5D6 327 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-229ENST00000554672 TAS1R1Q7RTX1 841 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 HEATR3Q7Z4Q2 680 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 MRPL10Q7Z7H8 261 aaKnown RBP5.4□□□□□ -1.54
ATXN3-229ENST00000554672 PALB2Q86YC2 1186 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 FANCBQ8NB91 859 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 FBXO15Q8NCQ5 510 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-229ENST00000554672 FBXO27Q8NI29 283 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 RNF141Q8WVD5 230 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 FGF14Q92915 247 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 ZNF577Q9BSK1 485 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 MYL10Q9BUA6 226 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 HERC2P3Q9BVR0 1158 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 LNPKQ9C0E8 428 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 UBN1Q9NPG3 1134 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.4□□□□□ -1.54
ATXN3-229ENST00000554672 CHST7Q9NS84 486 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 SEMA4GQ9NTN9 838 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 TCEAL9Q9UHQ7 104 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 DUSP13Q9UII6 198 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 CDH7Q9ULB5 785 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 PCDHB2Q9Y5E7 798 aa5.4□□□□□ -1.54
ATXN3-229ENST00000554672 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.4□□□□□ -1.54
ATXN3-229ENST00000554672 ATG2AQ2TAZ0 1938 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 A0A087WZ62 844 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 SHISA3A0PJX4 238 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 SMCO2A6NFE2 343 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 MEIS3P2A8K0S8 358 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 TGM5O43548 720 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 B4GALT3O60512 393 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 HTR3BO95264 441 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 EFEMP2O95967 443 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 PROS1P07225 676 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 HNRNPA1P09651 372 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 RAC2P15153 192 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 CD72P21854 359 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 LIFRP42702 1097 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 OR1G1P47890 313 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 ADCY7P51828 1080 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 YARSP54577 528 aaKnown RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 NAPAP54920 295 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 ANTXR2P58335 489 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 SETQ01105 290 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 CREMQ03060 361 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 FAM160A1Q05DH4 1040 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 EGR3Q06889 387 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 ADCY1Q08828 1119 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 MTAPQ13126 283 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 TARBP2Q15633 366 aaKnown RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 USP41Q3LFD5 358 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms