RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 RALGPS2Q86X27 583 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-215ENST00000554656 METTL23Q86XA0 190 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 GLIS3Q8NEA6 775 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 FAM200AQ8TCP9 573 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 C2orf15Q8WU43 125 aaKnown RBP11.37□□□□□ -0.59
SHMT2-215ENST00000554656 ZNF560Q96MR9 790 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 ACCSQ96QU6 501 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 PI4K2AQ9BTU6 479 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 HPS4Q9NQG7 708 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 OLFML3Q9NRN5 406 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 DPYSL4O14531 572 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 GCNT3O95395 438 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 ACAT1P24752 427 aaKnown RBP11.36□□□□□ -0.59
SHMT2-215ENST00000554656 ATXN1P54253 815 aaKnown RBP11.36□□□□□ -0.59
SHMT2-215ENST00000554656 NRLP54845 237 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 SPEM2Q0P670 501 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 LRRC32Q14392 662 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 POSTNQ15063 836 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 NAIF1Q69YI7 327 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-215ENST00000554656 TXNDC8Q6A555 127 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 TRIM68Q6AZZ1 485 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 KRBA2Q6ZNG9 492 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 SV2BQ7L1I2 683 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 GAS2L3Q86XJ1 694 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 NT5DC4Q86YG4 428 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 CMTM8Q8IZV2 173 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 THEM5Q8N1Q8 247 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 MAB21L3Q8N8X9 362 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 USP13Q92995 863 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-215ENST00000554656 FAM83CQ9BQN1 747 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 PDE11AQ9HCR9 933 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 GKN1Q9NS71 199 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 RBAKQ9NYW8 714 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-215ENST00000554656 CCDC39Q9UFE4 941 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 USP18Q9UMW8 372 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 AGAP1Q9UPQ3 857 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 PCDHB5Q9Y5E4 795 aa11.36□□□□□ -0.59
SHMT2-215ENST00000554656 TPRP12270 2363 aaKnown RBP11.36□□□□□ -0.59
SHMT2-215ENST00000554656 EXTL3O43909 919 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 PRPF6O94906 941 aaKnown RBP11.35□□□□□ -0.59
SHMT2-215ENST00000554656 IDEP14735 1019 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 ARSAP15289 507 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 GARTP22102 1010 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 CYP2F1P24903 491 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 HOXD13P35453 343 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 PNPLA4P41247 253 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 PLCB2Q00722 1185 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 SMARCB1Q12824 385 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 BFSP1Q12934 665 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 ITPRIPL2Q3MIP1 535 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 INTS6LQ5JSJ4 861 aaKnown RBP11.35□□□□□ -0.59
SHMT2-215ENST00000554656 DGKKQ5KSL6 1271 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 LMBRD2Q68DH5 695 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-215ENST00000554656 HEATR6Q6AI08 1181 aaKnown RBP11.35□□□□□ -0.59
SHMT2-215ENST00000554656 LAIR1Q6GTX8 287 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 FSTL4Q6MZW2 842 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 C1orf228Q6PIY5 440 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 SASS6Q6UVJ0 657 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 PRR23BQ6ZRT6 265 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 DCP1BQ8IZD4 617 aaKnown RBP11.35□□□□□ -0.59
SHMT2-215ENST00000554656 CELF5Q8N6W0 485 aaKnown RBP11.35□□□□□ -0.59
SHMT2-215ENST00000554656 HPS3Q969F9 1004 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 GCNAQ96QF7 691 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 SLC22A12Q96S37 553 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 PANK2Q9BZ23 570 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 MTMR12Q9C0I1 747 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 CUEDC2Q9H467 287 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 PCIF1Q9H4Z3 704 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 GRPEL1Q9HAV7 217 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 POLR3BQ9NW08 1133 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-215ENST00000554656 GDAP2Q9NXN4 497 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 DDX43Q9NXZ2 648 aaKnown RBP11.35□□□□□ -0.59
SHMT2-215ENST00000554656 GMEB2Q9UKD1 530 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 EXOC7Q9UPT5 735 aa11.35□□□□□ -0.59
SHMT2-215ENST00000554656 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.35□□□□□ -0.59
SHMT2-215ENST00000554656 GABRDO14764 452 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 NOL4O94818 638 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 SLFN14P0C7P3 912 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 STAT6P42226 847 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 TSPY1Q01534 308 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 LMNB2Q03252 620 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 TYRO3Q06418 890 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 SIM2Q14190 667 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-215ENST00000554656 PPP2R5DQ14738 602 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 CAMK4Q16566 473 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 DDR2Q16832 855 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 SOWAHAQ2M3V2 549 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 LIMS2Q7Z4I7 341 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 CSGALNACT2Q8N6G5 542 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 GPR161Q8N6U8 529 aaKnown RBP11.34□□□□□ -0.59
SHMT2-215ENST00000554656 LRRC52Q8N7C0 313 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 PDILTQ8N807 584 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 IQUBQ8NA54 791 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 OR5B17Q8NGF7 314 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 KBTBD7Q8WVZ9 684 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 SECISBP2LQ93073 1101 aaKnown RBP11.34□□□□□ -0.59
SHMT2-215ENST00000554656 ACBD6Q9BR61 282 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 EBF3Q9H4W6 596 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 MAGEF1Q9HAY2 307 aa11.34□□□□□ -0.59
SHMT2-215ENST00000554656 FBRSL1Q9HCM7 1045 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms