RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 DPH6Q7L8W6 267 aa12.86□□□□□ -0.35
LRP1-207ENST00000554174 SHCBP1Q8NEM2 672 aa12.86□□□□□ -0.35
LRP1-207ENST00000554174 PPTC7Q8NI37 304 aa12.86□□□□□ -0.35
LRP1-207ENST00000554174 UBA3Q8TBC4 463 aa12.86□□□□□ -0.35
LRP1-207ENST00000554174 KATNBL1Q9H079 304 aa12.86□□□□□ -0.35
LRP1-207ENST00000554174 SAYSD1Q9NPB0 183 aa12.86□□□□□ -0.35
LRP1-207ENST00000554174 DDX56Q9NY93 547 aaKnown RBP12.86□□□□□ -0.35
LRP1-207ENST00000554174 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.86□□□□□ -0.35
LRP1-207ENST00000554174 AGAP1Q9UPQ3 857 aa12.86□□□□□ -0.35
LRP1-207ENST00000554174 NAALADL1Q9UQQ1 740 aa12.86□□□□□ -0.35
LRP1-207ENST00000554174 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.86□□□□□ -0.35
LRP1-207ENST00000554174 CAPN7Q9Y6W3 813 aa12.86□□□□□ -0.35
LRP1-207ENST00000554174 TCEA3O75764 348 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 GH1P01241 217 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 IFNB1P01574 187 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 GPD2P43304 727 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 POU5F1BQ06416 359 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 ADCY1Q08828 1119 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 MARCH8Q5T0T0 291 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 LDLRAD1Q5T700 205 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 SH3PXD2AQ5TCZ1 1133 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 MTHFD1LQ6UB35 978 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 USP50Q70EL3 339 aaPredicted RBP12.85□□□□□ -0.35
LRP1-207ENST00000554174 POLNQ7Z5Q5 900 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 IFNLR1Q8IU57 520 aaPredicted RBP12.85□□□□□ -0.35
LRP1-207ENST00000554174 GPRC5AQ8NFJ5 357 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 SLC35B2Q8TB61 432 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 PPP1R13LQ8WUF5 828 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 NKD2Q969F2 451 aaPredicted RBP12.85□□□□□ -0.35
LRP1-207ENST00000554174 HPDLQ96IR7 371 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 PIWIL1Q96J94 861 aaKnown RBP12.85□□□□□ -0.35
LRP1-207ENST00000554174 CCDC134Q9H6E4 229 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 SYNCQ9H7C4 482 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 DRG1Q9Y295 367 aaKnown RBP12.85□□□□□ -0.35
LRP1-207ENST00000554174 PLXNB2O15031 1838 aa12.85□□□□□ -0.35
LRP1-207ENST00000554174 M0QYV0 167 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 SGK1O00141 431 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 DNM1LO00429 736 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 TSPAN1O60635 241 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 CST8O60676 142 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 BANF1O75531 89 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 FSBPO95073 299 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 SNAI1O95863 264 aaPredicted RBP12.84□□□□□ -0.35
LRP1-207ENST00000554174 ITGAVP06756 1048 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 KDELR1P24390 212 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 GCAP28676 217 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 OTUD4Q01804 1114 aaKnown RBP12.84□□□□□ -0.35
LRP1-207ENST00000554174 TTC31Q49AM3 519 aaPredicted RBP12.84□□□□□ -0.35
LRP1-207ENST00000554174 FAM182AQ5T1J6 154 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 RNASEH2BQ5TBB1 312 aaKnown RBP12.84□□□□□ -0.35
LRP1-207ENST00000554174 TRNP1Q6NT89 227 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 ARMC9Q7Z3E5 817 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 ACTL9Q8TC94 416 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 NLRP7Q8WX94 980 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 HEXIM2Q96MH2 286 aaKnown RBP12.84□□□□□ -0.35
LRP1-207ENST00000554174 EURLQ9NYK6 297 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 TPX2Q9ULW0 747 aaKnown RBP12.84□□□□□ -0.35
LRP1-207ENST00000554174 CITO14578 2027 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 H3BRB1 525 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 GOLGA8MH3BSY2 632 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 MAGEB2O15479 319 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 VIMP08670 466 aaKnown RBP12.84□□□□□ -0.35
LRP1-207ENST00000554174 MIPP30301 263 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 NDST1P52848 882 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 TMEM132DQ14C87 1099 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 CCDC142Q17RM4 750 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 CAPN12Q6ZSI9 719 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 PIGWQ7Z7B1 504 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 C12orf29Q8N999 325 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 ANKRD42Q8N9B4 389 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 FNIP1Q8TF40 1166 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 SLC10A4Q96EP9 437 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 PEBP4Q96S96 227 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 ASB7Q9H672 318 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 TUT1Q9H6E5 874 aaKnown RBP12.84□□□□□ -0.35
LRP1-207ENST00000554174 KCNK9Q9NPC2 374 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 TMEM51Q9NW97 253 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
LRP1-207ENST00000554174 LGALS13Q9UHV8 139 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 SCN1AP35498 2009 aa12.84□□□□□ -0.35
LRP1-207ENST00000554174 LOC102724159A0A0B4J2E5 919 aa12.83□□□□□ -0.36
LRP1-207ENST00000554174 PDHXO00330 501 aa12.83□□□□□ -0.36
LRP1-207ENST00000554174 BRAFP15056 766 aa12.83□□□□□ -0.36
LRP1-207ENST00000554174 NRLP54845 237 aa12.83□□□□□ -0.36
LRP1-207ENST00000554174 GSCP56915 257 aaPredicted RBP12.83□□□□□ -0.36
LRP1-207ENST00000554174 TNFAIP2Q03169 654 aa12.83□□□□□ -0.36
LRP1-207ENST00000554174 SLC20A2Q08357 652 aa12.83□□□□□ -0.36
LRP1-207ENST00000554174 ZNF268Q14587 947 aaPredicted RBP12.83□□□□□ -0.36
LRP1-207ENST00000554174 PWP2Q15269 919 aaKnown RBP12.83□□□□□ -0.36
LRP1-207ENST00000554174 CCDC121Q6ZUS5 278 aa12.83□□□□□ -0.36
LRP1-207ENST00000554174 SRRM1Q8IYB3 904 aaKnown RBP12.83□□□□□ -0.36
LRP1-207ENST00000554174 TAB3Q8N5C8 712 aaPredicted RBP12.83□□□□□ -0.36
LRP1-207ENST00000554174 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.36
LRP1-207ENST00000554174 HSPH1Q92598 858 aa12.83□□□□□ -0.36
LRP1-207ENST00000554174 MCRS1Q96EZ8 462 aa12.83□□□□□ -0.36
LRP1-207ENST00000554174 L3MBTL3Q96JM7 780 aaPredicted RBP12.83□□□□□ -0.36
LRP1-207ENST00000554174 ELAC2Q9BQ52 826 aaKnown RBP12.83□□□□□ -0.36
LRP1-207ENST00000554174 VRTNQ9H8Y1 702 aa12.83□□□□□ -0.36
LRP1-207ENST00000554174 RNF19AQ9NV58 838 aa12.83□□□□□ -0.36
LRP1-207ENST00000554174 A0A1B0GUA9 196 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms