RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 PKDCCQ504Y2 493 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 MDH1BQ5I0G3 518 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 VARS2Q5ST30 1063 aaKnown RBP12.45□□□□□ -0.42
NEK9-202ENST00000553823 FAM171BQ6P995 826 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 NYAP1Q6ZVC0 841 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 MON1BQ7L1V2 547 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 CEP57Q86XR8 500 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 MCOLN2Q8IZK6 566 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 FIBCD1Q8N539 461 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 ANKRD52Q8NB46 1076 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 OR10T2Q8NGX3 314 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 UBA3Q8TBC4 463 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 MYCBPAPQ8TBZ2 947 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 SLC2A14Q8TDB8 520 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 TRIM11Q96F44 468 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 TMEM169Q96HH4 297 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 NOX5Q96PH1 765 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 THAP2Q9H0W7 228 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 AAASQ9NRG9 546 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 ADAM22Q9P0K1 906 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 GTF3C4Q9UKN8 822 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 DUSP10Q9Y6W6 482 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 PDE4DIPQ5VU43 2346 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 MYO9BQ13459 2157 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 NLRC5Q86WI3 1866 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 NCANO14594 1321 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 MACROD2A1Z1Q3 448 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 OR6C75A6NL08 312 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 H7C4K7 107 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 KIF2AO00139 706 aaPredicted RBP12.44□□□□□ -0.42
NEK9-202ENST00000553823 TLL1O43897 1013 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 KIF5CO60282 957 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 CALB1P05937 261 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 MMP8P22894 467 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 PPM1AP35813 382 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 MAGEA10P43363 369 aaPredicted RBP12.44□□□□□ -0.42
NEK9-202ENST00000553823 BCAT1P54687 386 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 PLCB3Q01970 1234 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 BST2Q10589 180 aaKnown RBP12.44□□□□□ -0.42
NEK9-202ENST00000553823 PTP4A2Q12974 167 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 CCDC142Q17RM4 750 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 USP41Q3LFD5 358 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 CTXN3Q4LDR2 81 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 LIN9Q5TKA1 542 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 ZNF280DQ6N043 979 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 MMS22LQ6ZRQ5 1243 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 ANKS3Q6ZW76 656 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 TTC30AQ86WT1 665 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 ERICH1Q86X53 443 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 RNF168Q8IYW5 571 aaPredicted RBP12.44□□□□□ -0.42
NEK9-202ENST00000553823 FUKQ8N0W3 1084 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 RNF10Q8N5U6 811 aaKnown RBP12.44□□□□□ -0.42
NEK9-202ENST00000553823 MSANTD4Q8NCY6 345 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 RFFLQ8WZ73 363 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 SECISBP2LQ93073 1101 aaKnown RBP12.44□□□□□ -0.42
NEK9-202ENST00000553823 ZNF653Q96CK0 615 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 ARHGEF26Q96DR7 871 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 PCED1BQ96HM7 432 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 C16orf45Q96MC5 204 aaPredicted RBP12.44□□□□□ -0.42
NEK9-202ENST00000553823 PKMYT1Q99640 499 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 C11orf70Q9BRQ4 267 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 MED10Q9BTT4 135 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 TTPALQ9BTX7 342 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 B3GNT5Q9BYG0 378 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 AVENQ9NQS1 362 aaPredicted RBP12.44□□□□□ -0.42
NEK9-202ENST00000553823 MYO1AQ9UBC5 1043 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 PCDHB12Q9Y5F1 795 aa12.44□□□□□ -0.42
NEK9-202ENST00000553823 CLDN5O00501 218 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 TUBB4AP04350 444 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 CYP1A2P05177 515 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 NOP2P46087 812 aaKnown RBP12.43□□□□□ -0.42
NEK9-202ENST00000553823 NAP1L1P55209 391 aaKnown RBP12.43□□□□□ -0.42
NEK9-202ENST00000553823 SLC8A3P57103 927 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 PDE4CQ08493 712 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 PDCLQ13371 301 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 TCEAL1Q15170 157 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 IFI16Q16666 785 aaKnown RBP12.43□□□□□ -0.42
NEK9-202ENST00000553823 PTPN20Q4JDL3 420 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 RTP2Q5QGT7 225 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 C9orf50Q5SZB4 431 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 PAQR9Q6ZVX9 377 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 TAS1R1Q7RTX1 841 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 FAM35AQ86V20 835 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 LRRTM3Q86VH5 581 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 RHOT2Q8IXI1 618 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 DCP1BQ8IZD4 617 aaKnown RBP12.43□□□□□ -0.42
NEK9-202ENST00000553823 SLC35G2Q8TBE7 412 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 IPO4Q8TEX9 1081 aaKnown RBP12.43□□□□□ -0.42
NEK9-202ENST00000553823 STK32AQ8WU08 396 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 SLC35F5Q8WV83 523 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 CLP1Q92989 425 aaKnown RBP12.43□□□□□ -0.42
NEK9-202ENST00000553823 MYLPFQ96A32 169 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 B3GALT6Q96L58 329 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 RNPC3Q96LT9 517 aaKnown RBP12.43□□□□□ -0.42
NEK9-202ENST00000553823 TMEM209Q96SK2 561 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 VN1R3Q9BXE9 311 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 DUSP16Q9BY84 665 aa12.43□□□□□ -0.42
NEK9-202ENST00000553823 OXCT2Q9BYC2 517 aaPredicted RBP12.43□□□□□ -0.42
NEK9-202ENST00000553823 IRX2Q9BZI1 471 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms