RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 SYN1P17600 705 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 BRCC3P46736 316 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 OR1G1P47890 313 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 EPHB4P54760 987 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 HADHBP55084 474 aaKnown RBP14.92□□□□□ -0.02
ABCD4-219ENST00000553745 TIGD5Q53EQ6 642 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 COL13A1Q5TAT6 717 aaPredicted RBP14.92□□□□□ -0.02
ABCD4-219ENST00000553745 TTC39CQ8N584 583 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 TOP6BLQ8N6T0 577 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 OR6B3Q8NGW1 331 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 TFAP2BQ92481 460 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 CAVIN3Q969G5 261 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 EXOC4Q96A65 974 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 ARHGEF26Q96DR7 871 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 TMEM176AQ96HP8 235 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 MRPL9Q9BYD2 267 aaKnown RBP14.92□□□□□ -0.02
ABCD4-219ENST00000553745 NRDE2Q9H7Z3 1164 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 OSGEPQ9NPF4 335 aa14.92□□□□□ -0.02
ABCD4-219ENST00000553745 AGPSO00116 658 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 BUB1BO60566 1050 aaPredicted RBP14.91□□□□□ -0.02
ABCD4-219ENST00000553745 BAIAP3O94812 1187 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 AMHP03971 560 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 PAEPP09466 180 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 CD19P15391 556 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 GYS2P54840 703 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 FPGSQ05932 587 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 PPIGQ13427 754 aaKnown RBP eCLIP14.91□□□□□ -0.021e-7■■□□□ 11.9
ABCD4-219ENST00000553745 SMYD5Q6GMV2 418 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 EMBQ6PCB8 327 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 DSTYKQ6XUX3 929 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 C16orf59Q7L2K0 433 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 OTOP2Q7RTS6 562 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 OSTM1Q86WC4 334 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 LRRC43Q8N309 656 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 ZNF606Q8WXB4 792 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 TOP1MTQ969P6 601 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 ABHD8Q96I13 439 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 CALR3Q96L12 384 aaKnown RBP14.91□□□□□ -0.02
ABCD4-219ENST00000553745 NT5C1AQ9BXI3 368 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 DPEP3Q9H4B8 488 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 FAN1Q9Y2M0 1017 aa14.91□□□□□ -0.02
ABCD4-219ENST00000553745 PRG3Q9Y2Y8 225 aaPredicted RBP14.91□□□□□ -0.02
ABCD4-219ENST00000553745 LAMA2P24043 3122 aaKnown RBP14.91□□□□□ -0.02
ABCD4-219ENST00000553745 CEP104O60308 925 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 EFCAB14O75071 495 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 DGKIO75912 1065 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 WARSP23381 471 aaKnown RBP14.9□□□□□ -0.02
ABCD4-219ENST00000553745 RNASE9P60153 205 aaKnown RBP14.9□□□□□ -0.02
ABCD4-219ENST00000553745 NNTQ13423 1086 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 WSCD1Q658N2 575 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 DCLRE1AQ6PJP8 1040 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 SND1Q7KZF4 910 aaKnown RBP eCLIP14.9□□□□□ -0.02
ABCD4-219ENST00000553745 DPH6Q7L8W6 267 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 DAAM2Q86T65 1068 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 PASD1Q8IV76 773 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 IFT20Q8IY31 132 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 CTNNBL1Q8WYA6 563 aaPredicted RBP14.9□□□□□ -0.02
ABCD4-219ENST00000553745 GDAP1L1Q96MZ0 367 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 KRT12Q99456 494 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 HTATIP2Q9BUP3 242 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 THAP2Q9H0W7 228 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 AMFRQ9UKV5 643 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 TTC7AQ9ULT0 858 aaPredicted RBP14.9□□□□□ -0.02
ABCD4-219ENST00000553745 ZMYND8Q9ULU4 1186 aaPredicted RBP14.9□□□□□ -0.02
ABCD4-219ENST00000553745 TIMM13Q9Y5L4 95 aaPredicted RBP14.9□□□□□ -0.02
ABCD4-219ENST00000553745 A8MXQ7 604 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 TMEM189-UBE2V1I3L0A0 370 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 DDX3YO15523 660 aaKnown RBP14.9□□□□□ -0.02
ABCD4-219ENST00000553745 HEXIM1O94992 359 aaKnown RBP14.9□□□□□ -0.02
ABCD4-219ENST00000553745 ODC1P11926 461 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 CLEC16AQ2KHT3 1053 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 HSP90B2PQ58FF3 399 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 FAM117BQ6P1L5 589 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 UNC93AQ86WB7 457 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 RSPH1Q8WYR4 309 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.9□□□□□ -0.022e-7■□□□□ 11.3
ABCD4-219ENST00000553745 SNX25Q9H3E2 840 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 RC3H2Q9HBD1 1191 aaKnown RBP14.9□□□□□ -0.02
ABCD4-219ENST00000553745 VPS18Q9P253 973 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 COG5Q9UP83 839 aa14.9□□□□□ -0.02
ABCD4-219ENST00000553745 ZBBXA8MT70 800 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 M0QZQ0 153 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 PGRMC1O00264 195 aaKnown RBP14.89□□□□□ -0.03
ABCD4-219ENST00000553745 NRP1O14786 923 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 RAD51CO43502 376 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 ABCB4P21439 1286 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 LMO2P25791 158 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 GNL1P36915 607 aaPredicted RBP14.89□□□□□ -0.03
ABCD4-219ENST00000553745 PBX3P40426 434 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 SLC11A1P49279 550 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 CARSP49589 748 aaKnown RBP14.89□□□□□ -0.03
ABCD4-219ENST00000553745 ZNF365Q70YC5 407 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 ACOT1Q86TX2 421 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 CYFIP2Q96F07 1278 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 SUSD3Q96L08 255 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 HEXIM2Q96MH2 286 aaKnown RBP14.89□□□□□ -0.03
ABCD4-219ENST00000553745 EPB41L5Q9HCM4 733 aa14.89□□□□□ -0.03
ABCD4-219ENST00000553745 ZSCAN5CA6NGD5 496 aaPredicted RBP14.88□□□□□ -0.03
ABCD4-219ENST00000553745 GABRDO14764 452 aa14.88□□□□□ -0.03
ABCD4-219ENST00000553745 RTN2O75298 545 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms