RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 INSL5Q9Y5Q6 135 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 ASCC3Q8N3C0 2202 aaKnown RBP7.99□□□□□ -1.13
ATXN3-219ENST00000553488 A0A087WWV3 80 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 CHURC1-FNTBB4DL54 471 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 ACKR2O00590 384 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 CPLX1O14810 134 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 TM4SF5O14894 197 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 B3GAT3O94766 335 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 LRG1P02750 347 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 PRKCBP05771 671 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 CPB1P15086 417 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 ATF2P15336 505 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 PSMC3P17980 439 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 PSMA5P28066 241 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 GDI1P31150 447 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 VIPR2P41587 438 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 CXCL12P48061 93 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 FNTBP49356 437 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 LIMK1P53667 647 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 EPHA5P54756 1037 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 MLLT6P55198 1093 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-219ENST00000553488 SCRN1Q12765 414 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 STK3Q13188 491 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 PRPF4BQ13523 1007 aaKnown RBP7.99□□□□□ -1.13
ATXN3-219ENST00000553488 SIM2Q14190 667 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-219ENST00000553488 MRPL58Q14197 206 aaKnown RBP7.99□□□□□ -1.13
ATXN3-219ENST00000553488 PPP2R5DQ14738 602 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 CACNA1EQ15878 2313 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 DCAF4L1Q3SXM0 396 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 XKR4Q5GH76 650 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 TXNDC11Q6PKC3 985 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 Q6ZS52 159 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-219ENST00000553488 ATCAYQ86WG3 371 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 ZBTB8OSQ8IWT0 167 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 SPEM1Q8N4L4 309 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 MCPH1Q8NEM0 835 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 OR13H1Q8NG92 308 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 SMARCD2Q92925 531 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 CCDC43Q96MW1 224 aaKnown RBP7.99□□□□□ -1.13
ATXN3-219ENST00000553488 UROC1Q96N76 676 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 CORO1BQ9BR76 489 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 C2orf40Q9H1Z8 148 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 RBM12Q9NTZ6 932 aaKnown RBP7.99□□□□□ -1.13
ATXN3-219ENST00000553488 CEP72Q9P209 647 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 ANGPTL2Q9UKU9 493 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 GDAQ9Y2T3 454 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 PTPRDP23468 1912 aa7.99□□□□□ -1.13
ATXN3-219ENST00000553488 CELSR3Q9NYQ7 3312 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 PRRG1O14668 218 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 MEFVO15553 781 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-219ENST00000553488 FOXD2O60548 495 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-219ENST00000553488 DTNBO60941 627 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 RGS9O75916 674 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-219ENST00000553488 XRCC6P12956 609 aaKnown RBP eCLIP7.98□□□□□ -1.13
ATXN3-219ENST00000553488 CCNE1P24864 410 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 CNR2P34972 360 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 NAMPTP43490 491 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 FCHO2Q0JRZ9 810 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 CALCRLQ16602 461 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 MAPK6Q16659 721 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 N4BP2L1Q5TBK1 243 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-219ENST00000553488 NT5DC1Q5TFE4 455 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 XKR5Q6UX68 686 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 ALKAL1Q6UXT8 129 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 PDZD4Q76G19 769 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-219ENST00000553488 MAEAQ7L5Y9 396 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 LONP2Q86WA8 852 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 MFSD6LQ8IWD5 586 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 ABCA7Q8IZY2 2146 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 CEP120Q8N960 986 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 DDX1Q92499 740 aaKnown RBP7.98□□□□□ -1.13
ATXN3-219ENST00000553488 MSANTD3Q96H12 275 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 CHAMP1Q96JM3 812 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 MTMR9Q96QG7 549 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 ADPGKQ9BRR6 497 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 KIFC3Q9BVG8 833 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 TTC12Q9H892 705 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-219ENST00000553488 RXFP3Q9NSD7 469 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 FBXL5Q9UKA1 691 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 PCDHA12Q9UN75 941 aa7.98□□□□□ -1.13
ATXN3-219ENST00000553488 PI4KAP42356 2102 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 TNRC6BQ9UPQ9 1833 aaKnown RBP7.97□□□□□ -1.13
ATXN3-219ENST00000553488 SCN1AP35498 2009 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 A0A0A0MRY4 1105 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 SMIM28A0A1B0GU29 152 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 MYBPHLA2RUH7 354 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 HEPACAM2A8MVW5 462 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 PODXLO00592 558 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 ZNF197O14709 1029 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 SYN3O14994 580 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 TRAPPC3O43617 180 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 MARCH6O60337 910 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 MED24O75448 989 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 EPN2O95208 641 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 BAG4O95429 457 aaKnown RBP7.97□□□□□ -1.13
ATXN3-219ENST00000553488 CTDNEP1O95476 244 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 VNN2O95498 520 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 GJA1P17302 382 aa7.97□□□□□ -1.13
ATXN3-219ENST00000553488 MPSTP25325 297 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms