RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 PSMC1P62191 440 aaKnown RBP16.36■□□□□ 0.21
SHMT2-204ENST00000553324 CYP27A1Q02318 531 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 PPP3CAQ08209 521 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 DDR2Q16832 855 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 TANGO2Q6ICL3 276 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 GAREM2Q75VX8 874 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 UNC93AQ86WB7 457 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 B3GALNT2Q8NCR0 500 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 ZSCAN18Q8TBC5 510 aaPredicted RBP16.36■□□□□ 0.21
SHMT2-204ENST00000553324 EEF2KMTQ96G04 330 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 PCED1BQ96HM7 432 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 SHDQ96IW2 340 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 SPATA17Q96L03 361 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 CYP3A43Q9HB55 503 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 CRTAC1Q9NQ79 661 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 ARMCX3Q9UH62 379 aaPredicted RBP16.36■□□□□ 0.21
SHMT2-204ENST00000553324 TECTAO75443 2155 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 PPP1R3GB7ZBB8 358 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 HCRTO43612 131 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 FGFR1OPO95684 399 aaKnown RBP16.35■□□□□ 0.21
SHMT2-204ENST00000553324 HMGA1P17096 107 aaKnown RBP16.35■□□□□ 0.21
SHMT2-204ENST00000553324 GJA1P17302 382 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 BDNFP23560 247 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 ANXA13P27216 316 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 CDR1P51861 262 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 PMS1P54277 932 aaKnown RBP16.35■□□□□ 0.21
SHMT2-204ENST00000553324 CDH8P55286 799 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 GPC5P78333 572 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 MDH1BQ5I0G3 518 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 WDR44Q5JSH3 913 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 FRMD5Q7Z6J6 570 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 SCN4BQ8IWT1 228 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 SIX5Q8N196 739 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 TTC39CQ8N584 583 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 GPR152Q8TDT2 470 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 DEPDC1BQ8WUY9 529 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 MYLPFQ96A32 169 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 TRMT2BQ96GJ1 504 aaKnown RBP16.35■□□□□ 0.21
SHMT2-204ENST00000553324 MYRFLQ96LU7 910 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 ZSWIM3Q96MP5 696 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 GBP4Q96PP9 640 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 KXD1Q9BQD3 176 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 TRMT61BQ9BVS5 477 aaKnown RBP16.35■□□□□ 0.21
SHMT2-204ENST00000553324 ELOVL4Q9GZR5 314 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 FAM124BQ9H5Z6 455 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-204ENST00000553324 TASP1Q9H6P5 420 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 SMYD3Q9H7B4 428 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 MMRN2Q9H8L6 949 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 ZNF334Q9HCZ1 680 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-204ENST00000553324 ATP8B3O60423 1300 aa16.35■□□□□ 0.21
SHMT2-204ENST00000553324 BIN1O00499 593 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 STK25O00506 426 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 NOL4O94818 638 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 GNA14O95837 355 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 PSMC3P17980 439 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 AVPR2P30518 371 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 MXI1P50539 228 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 CAMK4Q16566 473 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 GPR158Q5T848 1215 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 TCERG1LQ5VWI1 586 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 ASTLQ6HA08 431 aaPredicted RBP16.34■□□□□ 0.21
SHMT2-204ENST00000553324 KLHL10Q6JEL2 608 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 MFSD6LQ8IWD5 586 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 FBXL13Q8NEE6 735 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 TAS1R2Q8TE23 839 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 NELFBQ8WX92 580 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 MRPS31Q92665 395 aaKnown RBP16.34■□□□□ 0.21
SHMT2-204ENST00000553324 C8orf48Q96LL4 319 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 IL21Q9HBE4 155 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 RAB20Q9NX57 234 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 OBP2AQ9NY56 170 aa16.34■□□□□ 0.21
SHMT2-204ENST00000553324 MAGED2Q9UNF1 606 aaPredicted RBP16.34■□□□□ 0.21
SHMT2-204ENST00000553324 TRIM49BA6NDI0 452 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 SLC38A8A6NNN8 435 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 DPYSL4O14531 572 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 F11P03951 625 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 CD44P16070 742 aaKnown RBP16.33■□□□□ 0.2
SHMT2-204ENST00000553324 BMP6P22004 513 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 RFX1P22670 979 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 FCARP24071 287 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 PPP3CCP48454 512 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 GPR15P49685 360 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 NLRP12P59046 1061 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 NOP14P78316 857 aaKnown RBP16.33■□□□□ 0.2
SHMT2-204ENST00000553324 PRKCQQ04759 706 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 PAK1Q13153 545 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 SLC44A4Q53GD3 710 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 DCAF17Q5H9S7 520 aaPredicted RBP16.33■□□□□ 0.2
SHMT2-204ENST00000553324 PHLDB3Q6NSJ2 640 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 POTEHQ6S545 545 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 SCARA5Q6ZMJ2 495 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 ARID3BQ8IVW6 561 aaPredicted RBP16.33■□□□□ 0.2
SHMT2-204ENST00000553324 CRYBG2Q8N1P7 616 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 ST13P5Q8NFI4 369 aaPredicted RBP16.33■□□□□ 0.2
SHMT2-204ENST00000553324 IRF7Q92985 503 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 IPO9Q96P70 1041 aaKnown RBP16.33■□□□□ 0.2
SHMT2-204ENST00000553324 BCO2Q9BYV7 579 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 NIF3L1Q9GZT8 377 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 TRPV5Q9NQA5 729 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 ARHGEF3Q9NR81 526 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms