RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 RILPL1Q5EBL4 403 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 ZNF484Q5JVG2 852 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 PSRC1Q6PGN9 363 aaPredicted RBP6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 KIAA0319LQ8IZA0 1049 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 RDM1Q8NG50 284 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 PIGOQ8TEQ8 1089 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 CHAMP1Q96JM3 812 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 FAM167AQ96KS9 214 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 IGSF5Q9NSI5 407 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 IMPACTQ9P2X3 320 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 AKT3Q9Y243 479 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 GINS2Q9Y248 185 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 PCDHA2Q9Y5H9 948 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 CLIC4Q9Y696 253 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 CDY2AQ9Y6F7 541 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 MICAL3Q7RTP6 2002 aa6.19□□□□□ -1.42
SMARCC2-213ENST00000552627 SMIM35A0A1B0GVV1 85 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 VWA3AA6NCI4 1184 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 SEMA7AO75326 666 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 FGBP02675 491 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 MPOP05164 745 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 MED14OSP0DP75 135 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 IBSPP21815 317 aaPredicted RBP6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 SDHBP21912 280 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 GLDCP23378 1020 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 CD52P31358 61 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 YWHABP31946 246 aaKnown RBP6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 RFC2P35250 354 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 FXR1P51114 621 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 RABGGTBP53611 331 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 DEFB103AP81534 67 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 ATP2C1P98194 919 aaPredicted RBP6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 DMTNQ08495 405 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 GRB10Q13322 594 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 ORC2Q13416 577 aaPredicted RBP6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 LPIN1Q14693 890 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 SF3A1Q15459 793 aaKnown RBP6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 TARBP2Q15633 366 aaKnown RBP6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 ZRSR1Q15695 479 aaKnown RBP6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 KIZQ2M2Z5 673 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 TMEM266Q2M3C6 531 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 XKR9Q5GH70 373 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 XKR3Q5GH77 459 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 EEF1DP3Q658K8 133 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 EFCAB12Q6NXP0 572 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 TAF2Q6P1X5 1199 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.18□□□□□ -1.425e-10■■■■■ 38
SMARCC2-213ENST00000552627 ATG14Q6ZNE5 492 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 BRAPQ7Z569 592 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 CATSPER3Q86XQ3 398 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 LINC01465Q8N7H1 131 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 TMEM143Q96AN5 459 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 CEP170P1Q96L14 293 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 CEP89Q96ST8 783 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 PLIN2Q99541 437 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 HSD17B14Q9BPX1 270 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 MCMBPQ9BTE3 642 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 ZSWIM4Q9H7M6 989 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 AGO3Q9H9G7 860 aaKnown RBP6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 CYP26B1Q9NR63 512 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 NRBP2Q9NSY0 501 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 APEX2Q9UBZ4 518 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 LRWD1Q9UFC0 647 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 TRPV2Q9Y5S1 764 aa6.18□□□□□ -1.42
SMARCC2-213ENST00000552627 TEX51A0A1B0GUA7 166 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 TCAF2A6NFQ2 919 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 HRKO00198 91 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 ABLIM1O14639 778 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 ZNF500O60304 480 aaPredicted RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 CSDE1O75534 798 aaKnown RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 LETM1O95202 739 aaPredicted RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 CXCL10P02778 98 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 ZSCAN22P10073 491 aaPredicted RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 MYOGP15173 224 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 FGFR4P22455 802 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 MSNP26038 577 aaKnown RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 MARCKSP29966 332 aaPredicted RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 CCT6AP40227 531 aaKnown RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 SEPHS1P49903 392 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 POLGP54098 1239 aaPredicted RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 DLG4P78352 724 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 MVKQ03426 396 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 EMC2Q15006 297 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 FXNQ16595 210 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 PLEKHG4Q58EX7 1191 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 SPECC1Q5M775 1068 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 FBXO47Q5MNV8 452 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 POMZP3Q6PJE2 187 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 C6orf15Q6UXA7 325 aaPredicted RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 MAEAQ7L5Y9 396 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 KCNK18Q7Z418 384 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 RSPH3Q86UC2 560 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 FAM178BQ8IXR5 827 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 C4orf19Q8IY42 314 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 RPUSD2Q8IZ73 545 aaKnown RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 ZNF513Q8N8E2 541 aaPredicted RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 IGSF22Q8N9C0 903 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 BVESQ8NE79 360 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 DBF4BQ8NFT6 615 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 HERVK_113Q902F9 699 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms