RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	ACADM	P11310	421 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	EEF2	P13639	858 aa	Known RBP	4.6	□□□□□ -1.67
USP44-208	ENST00000552440	MTHFD2	P13995	350 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	FGFR2	P21802	821 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	STAT5A	P42229	794 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	TRPC1	P48995	793 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	FNTB	P49356	437 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	CCR9	P51686	369 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	MAP2K6	P52564	334 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	KRTAP10-2	P60368	255 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	AKAP17A	Q02040	695 aa	Known RBP	4.6	□□□□□ -1.67
USP44-208	ENST00000552440	CHRND	Q07001	517 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	MAP3K12	Q12852	859 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	COX10	Q12887	443 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	MRPL28	Q13084	256 aa	Known RBP	4.6	□□□□□ -1.67
USP44-208	ENST00000552440	SNAPC2	Q13487	334 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.6	□□□□□ -1.67
USP44-208	ENST00000552440	CNGA2	Q16280	664 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
USP44-208	ENST00000552440	WSCD2	Q2TBF2	565 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	PAN2	Q504Q3	1202 aa	Known RBP	4.6	□□□□□ -1.67
USP44-208	ENST00000552440	CATSPERE	Q5SY80	951 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	MBNL2	Q5VZF2	373 aa	Known RBP	4.6	□□□□□ -1.67
USP44-208	ENST00000552440	RAB12	Q6IQ22	244 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	TMTC3	Q6ZXV5	915 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	ATP11C	Q8NB49	1132 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	FANCB	Q8NB91	859 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	SPC24	Q8NBT2	197 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	ZBTB8A	Q96BR9	441 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	KIF1BP	Q96EK5	621 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	MSLNL	Q96KJ4	702 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	ANO3	Q9BYT9	981 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	DUSP12	Q9UNI6	340 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	TMEM5	Q9Y2B1	443 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	COA3	Q9Y2R0	106 aa	Predicted RBP	4.6	□□□□□ -1.67
USP44-208	ENST00000552440	ATAD2B	Q9ULI0	1458 aa		4.6	□□□□□ -1.67
USP44-208	ENST00000552440	FAM25E	A8MYX2	175 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	NT5C1B-RDH14	C9J2C7	533 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	MYO1F	O00160	1098 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	GTPBP1	O00178	669 aa	Known RBP	4.59	□□□□□ -1.67
USP44-208	ENST00000552440	UBE2C	O00762	179 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	IPO8	O15397	1037 aa	Known RBP	4.59	□□□□□ -1.67
USP44-208	ENST00000552440	MTSS1	O43312	755 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	CYP7B1	O75881	506 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	TPPP	O94811	219 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	APBB3	O95704	486 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	FTL	P02792	175 aa	Predicted RBP	4.59	□□□□□ -1.67
USP44-208	ENST00000552440	FUCA1	P04066	466 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	A1BG	P04217	495 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	IL4R	P24394	825 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	SDHA	P31040	664 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	HSPA4	P34932	840 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	SEC24C	P53992	1094 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	POLR2F	P61218	127 aa	Known RBP	4.59	□□□□□ -1.67
USP44-208	ENST00000552440	MRPS9	P82933	396 aa	Known RBP	4.59	□□□□□ -1.67
USP44-208	ENST00000552440	RBP5	P82980	135 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	DLX2	Q07687	328 aa	Predicted RBP	4.59	□□□□□ -1.67
USP44-208	ENST00000552440	LRMP	Q12912	555 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	BFSP1	Q12934	665 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	KCNB1	Q14721	858 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	UGT8	Q16880	541 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	TMEM266	Q2M3C6	531 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	CCDC157	Q569K6	752 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	MUM1L1	Q5H9M0	696 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	PITRM1	Q5JRX3	1037 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	MROH9	Q5TGP6	573 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	BTNL9	Q6UXG8	535 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	KCTD1	Q719H9	257 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	ZNF761	Q86XN6	746 aa	Predicted RBP	4.59	□□□□□ -1.67
USP44-208	ENST00000552440	TBC1D21	Q8IYX1	336 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	ZNF540	Q8NDQ6	660 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.59	□□□□□ -1.67
USP44-208	ENST00000552440	STYX	Q8WUJ0	223 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	GIMAP1	Q8WWP7	306 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	HGH1	Q9BTY7	390 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	GPR63	Q9BZJ6	419 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	PRDM13	Q9H4Q3	707 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	EPS8L2	Q9H6S3	715 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	ARMT1	Q9H993	441 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	TM7SF3	Q9NS93	570 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	CTNNA3	Q9UI47	895 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440	HCFC2	Q9Y5Z7	792 aa		4.59	□□□□□ -1.67
USP44-208	ENST00000552440		A0A1B0GTL3	188 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	FAM234B	A2RU67	622 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	FAM90A27P	A6NNH2	459 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	CAPN9	O14815	690 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	SPTLC2	O15270	562 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	KIF5C	O60282	957 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	GJB3	O75712	270 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	ENDOD1	O94919	500 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	TNFRSF6B	O95407	300 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
USP44-208	ENST00000552440	CSH1	P0DML2	217 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	CSH2	P0DML3	217 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	JUP	P14923	745 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	BRAF	P15056	766 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	RPL13	P26373	211 aa	Known RBP	4.58	□□□□□ -1.68
USP44-208	ENST00000552440	ACSL1	P33121	698 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	MLH1	P40692	756 aa		4.58	□□□□□ -1.68
USP44-208	ENST00000552440	EPHA5	P54756	1037 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms