RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SLITRK6Q9H5Y7 841 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 GDE1Q9NZC3 331 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 NME7Q9Y5B8 376 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 NOTCH4Q99466 2003 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 MYO10Q9HD67 2058 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 C5orf42Q9H799 3197 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 MICAL2O94851 1124 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 CSH1P0DML2 217 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 CSH2P0DML3 217 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 CD58P19256 250 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 BDNFP23560 247 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 ERCC5P28715 1186 aaPredicted RBP19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 GRIK1P39086 918 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 GPR15P49685 360 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 NDST1P52848 882 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 MARSP56192 900 aaKnown RBP19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 DDR2Q16832 855 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 MTSS1LQ765P7 747 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 FAM114A1Q8IWE2 563 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 TRIM59Q8IWR1 403 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 TTC39CQ8N584 583 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 GPR152Q8TDT2 470 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 NXPE3Q969Y0 559 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 MCRS1Q96EZ8 462 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 FAXDC2Q96IV6 333 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 CNOT6LQ96LI5 555 aaKnown RBP19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 MED10Q9BTT4 135 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 C1QTNF1Q9BXJ1 281 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 EPHX3Q9H6B9 360 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 KCNK12Q9HB15 430 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 COQ4Q9Y3A0 265 aa19.68■□□□□ 0.74
PRPF40B-216ENST00000552301 TRIM66O15016 1216 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 P4HA2O15460 535 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 AFPP02771 609 aaKnown RBP19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 GABRR2P28476 465 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 CDC25CP30307 473 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 CCR2P41597 374 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 INCA1Q0VD86 236 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 ARHGAP15Q53QZ3 475 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 CT47A1Q5JQC4 288 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 SDHAF4Q5VUM1 108 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 RBM43Q6ZSC3 357 aaKnown RBP19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 ACOT1Q86TX2 421 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 TMC8Q8IU68 726 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 NT5C1AQ9BXI3 368 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 ATXN3LQ9H3M9 355 aa19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 UXTQ9UBK9 157 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 MAGED2Q9UNF1 606 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-216ENST00000552301 A0A1W2PRU2 124 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 LRRN2O75325 713 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 GJA1P17302 382 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 MTIF2P46199 727 aaKnown RBP19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 YWHAEP62258 255 aaKnown RBP19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 ZXDAP98168 799 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 KCNH2Q12809 1159 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 ORC1Q13415 861 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 TDGQ13569 410 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 HTR4Q13639 388 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 TEAD2Q15562 447 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 UBALD2Q8IYN6 164 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 PIAS4Q8N2W9 510 aaPredicted RBP19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 SHKBP1Q8TBC3 707 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 NT5C1BQ96P26 610 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 ZNF518BQ9C0D4 1074 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 GPR88Q9GZN0 384 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 THAP9Q9H5L6 903 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 ZNF334Q9HCZ1 680 aaPredicted RBP19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 ANO10Q9NW15 660 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 HMGXB4Q9UGU5 601 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 NUMBLQ9Y6R0 609 aa19.66■□□□□ 0.74
PRPF40B-216ENST00000552301 SLC38A8A6NNN8 435 aa19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 PMM2O15305 246 aa19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 LRMPQ12912 555 aa19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 STX1AQ16623 288 aa19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 FAM35AQ86V20 835 aa19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 EDAQ92838 391 aa19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 SMARCD1Q96GM5 515 aa19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 CEP295NLQ96MC4 621 aa19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 LRRC3Q9BY71 257 aa19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 B3GNT5Q9BYG0 378 aa19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 FAM124BQ9H5Z6 455 aaPredicted RBP19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 EHD2Q9NZN4 543 aa19.65■□□□□ 0.74
PRPF40B-216ENST00000552301 ANHXE9PGG2 379 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 F8VP50 259 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 CLDN5O00501 218 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 CILPO75339 1184 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 PTMSP20962 102 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 TBXAS1P24557 533 aaPredicted RBP19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 CUL2Q13617 745 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 PARM1Q6UWI2 310 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 CRYBG2Q8N1P7 616 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 STKLD1Q8NE28 680 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 ST13P5Q8NFI4 369 aaPredicted RBP19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 RSAD2Q8WXG1 361 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 TATDN2Q93075 761 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 MED15Q96RN5 788 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 KRT82Q9NSB4 513 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 CISHQ9NSE2 258 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 FAM49BQ9NUQ9 324 aa19.64■□□□□ 0.73
PRPF40B-216ENST00000552301 PTPRDP23468 1912 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms